(25 nodes) Mixed, incl. TrkA-N domain, and Amino acid/polyamine transporter I network (Natronomonas moolapensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

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protein homology

Your Input:
	cat1	Transport protein (probable substrate cationic amino acids). (769 aa)
	Nmlp_1071	UspA domain protein. (145 aa)
	kef1	Kef-type transport system. (618 aa)
	Nmlp_2194	Uncharacterized protein. (75 aa)
	Nmlp_2195	Uncharacterized protein. (115 aa)
	Nmlp_2198	DUF418 domain protein. (406 aa)
	trkA3	TrkA domain protein. (221 aa)
	cat4	Transport protein (probable substrate cationic amino acids). (491 aa)
	trkA4	TrkA domain protein. (217 aa)
	serA2	Probable D-2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (312 aa)
	Nmlp_2225	UspA domain protein. (124 aa)
	Nmlp_2978	TrkA-N domain protein. (143 aa)
	Nmlp_2979	Uncharacterized protein. (109 aa)
	Nmlp_2980	Uncharacterized protein. (112 aa)
	Nmlp_3036	Uncharacterized protein. (65 aa)
	entB1	Isochorismatase family protein. (188 aa)
	Nmlp_3038	YcgG family protein. (274 aa)
	Nmlp_3039	Uncharacterized protein. (95 aa)
	Nmlp_3352	Probable S-adenosylmethionine-dependent methyltransferase. (206 aa)
	Nmlp_3353	Flavin reductase domain protein. (200 aa)
	Nmlp_3354	Peptidase M20 family protein (homolog to carboxypeptidase). (432 aa)
	Nmlp_3355	Uncharacterized protein. (336 aa)
	pchA3	Ion channel pore / TrkA domain protein. (551 aa)
	trkA1	TrkA domain protein. (445 aa)
	trkH1	Trk-type transport system (probable substrate potassium). (511 aa)

Your Current Organism:

Natronomonas moolapensis

NCBI taxonomy Id: 268739
Other names: N. moolapensis 8.8.11, Natronomonas moolapensis 8.8.11, Natronomonas moolapensis DSM 18674, Natronomonas moolapensis JCM 14361, Natronomonas moolapensis str. 8.8.11, Natronomonas moolapensis strain 8.8.11, haloarchaeon CSW8.8.11

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Nmlp_1071	cat1	Nmlp_1071	Nmlp_1069	UspA domain protein.	Transport protein (probable substrate cationic amino acids).	0.516
Nmlp_2194	Nmlp_2195	Nmlp_2194	Nmlp_2195	Uncharacterized protein.	Uncharacterized protein.	0.524
Nmlp_2195	Nmlp_2194	Nmlp_2195	Nmlp_2194	Uncharacterized protein.	Uncharacterized protein.	0.524
Nmlp_2198	trkA3	Nmlp_2198	Nmlp_2199	DUF418 domain protein.	TrkA domain protein.	0.497
Nmlp_2225	serA2	Nmlp_2225	Nmlp_2224	UspA domain protein.	Probable D-2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.620
Nmlp_2225	trkA4	Nmlp_2225	Nmlp_2221	UspA domain protein.	TrkA domain protein.	0.473
Nmlp_2978	Nmlp_2979	Nmlp_2978	Nmlp_2979	TrkA-N domain protein.	Uncharacterized protein.	0.473
Nmlp_2978	kef1	Nmlp_2978	Nmlp_1992	TrkA-N domain protein.	Kef-type transport system.	0.449
Nmlp_2978	trkH1	Nmlp_2978	Nmlp_3693	TrkA-N domain protein.	Trk-type transport system (probable substrate potassium).	0.859
Nmlp_2979	Nmlp_2978	Nmlp_2979	Nmlp_2978	Uncharacterized protein.	TrkA-N domain protein.	0.473
Nmlp_2979	Nmlp_2980	Nmlp_2979	Nmlp_2980	Uncharacterized protein.	Uncharacterized protein.	0.536
Nmlp_2980	Nmlp_2979	Nmlp_2980	Nmlp_2979	Uncharacterized protein.	Uncharacterized protein.	0.536
Nmlp_3036	Nmlp_3038	Nmlp_3036	Nmlp_3038	Uncharacterized protein.	YcgG family protein.	0.486
Nmlp_3036	entB1	Nmlp_3036	Nmlp_3037	Uncharacterized protein.	Isochorismatase family protein.	0.486
Nmlp_3038	Nmlp_3036	Nmlp_3038	Nmlp_3036	YcgG family protein.	Uncharacterized protein.	0.486
Nmlp_3038	Nmlp_3039	Nmlp_3038	Nmlp_3039	YcgG family protein.	Uncharacterized protein.	0.601
Nmlp_3038	entB1	Nmlp_3038	Nmlp_3037	YcgG family protein.	Isochorismatase family protein.	0.880
Nmlp_3039	Nmlp_3038	Nmlp_3039	Nmlp_3038	Uncharacterized protein.	YcgG family protein.	0.601
Nmlp_3039	entB1	Nmlp_3039	Nmlp_3037	Uncharacterized protein.	Isochorismatase family protein.	0.538
Nmlp_3352	Nmlp_3353	Nmlp_3352	Nmlp_3353	Probable S-adenosylmethionine-dependent methyltransferase.	Flavin reductase domain protein.	0.443

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