STRINGSTRING
ligB ligB Nmlp_2665 Nmlp_2665 Nmlp_2666 Nmlp_2666 Nmlp_2698 Nmlp_2698 Nmlp_2780 Nmlp_2780 Nmlp_2929 Nmlp_2929 radB radB Nmlp_3148 Nmlp_3148 rpa1 rpa1 rpa3 rpa3 Nmlp_1096 Nmlp_1096 radA radA Nmlp_1012 Nmlp_1012 Nmlp_3610 Nmlp_3610 Nmlp_3611 Nmlp_3611 Nmlp_3676 Nmlp_3676 Nmlp_3686 Nmlp_3686 hjc hjc Nmlp_3946 Nmlp_3946 Nmlp_2509 Nmlp_2509 Nmlp_2495 Nmlp_2495 Nmlp_2491 Nmlp_2491 Nmlp_2167 Nmlp_2167 Nmlp_1933 Nmlp_1933 Nmlp_1905 Nmlp_1905 Nmlp_1853 Nmlp_1853 uvrD uvrD Nmlp_1751 Nmlp_1751 Nmlp_1738 Nmlp_1738 Nmlp_1728 Nmlp_1728 Nmlp_1646 Nmlp_1646 Nmlp_1635 Nmlp_1635 Nmlp_1621 Nmlp_1621 CCT61390.1 CCT61390.1 Nmlp_1510 Nmlp_1510 Nmlp_1438 Nmlp_1438 rpa2 rpa2 Nmlp_1286 Nmlp_1286 Nmlp_1285 Nmlp_1285 Nmlp_2597 Nmlp_2597 Nmlp_2605 Nmlp_2605 Nmlp_2572 Nmlp_2572 Nmlp_2651 Nmlp_2651
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ligBDNA ligase (ATP); DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (552 aa)
Nmlp_2665IS200-type transposase ISNamo17. (129 aa)
Nmlp_2666IS1341-type transposase ISNamo17. (411 aa)
Nmlp_2698XerC/D-like integrase. (345 aa)
Nmlp_2780IS1341-type transposase ISNamo26. (423 aa)
Nmlp_2929XerC/D-like integrase. (336 aa)
radBDNA repair and recombination protein RadB; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange. (236 aa)
Nmlp_3148IS1341-type transposase ISNamo20. (439 aa)
rpa1Replication protein A. (423 aa)
rpa3Replication protein A. (309 aa)
Nmlp_1096IS1341-type transposase ISNamo20. (439 aa)
radADNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. (345 aa)
Nmlp_1012IS1341-type transposase ISNamo20. (439 aa)
Nmlp_3610IS200-type transposase ISNamo19; Gene is interrupted (frameshift,in-frame stop) and is truncated at the N-terminus; locus_tag: Nmlp_3609; product: ISH14-type transposase NmIRS15 (nonfunctional). (129 aa)
Nmlp_3611IS1341-type transposase ISNamo19. (419 aa)
Nmlp_3676ISH9-type transposase ISNamo1. (271 aa)
Nmlp_3686Integrase family protein / sensor/bat box HTH-10 family transcription regulator. (837 aa)
hjcHolliday junction resolvase Hjc; A structure-specific endonuclease that resolves Holliday junction (HJ) intermediates during genetic recombination. Cleaves 4-way DNA junctions introducing paired nicks in opposing strands, leaving a 5'-terminal phosphate and a 3'-terminal hydroxyl group that are ligated to produce recombinant products; Belongs to the Holliday junction resolvase Hjc family. (173 aa)
Nmlp_3946Integrase family protein. (287 aa)
Nmlp_2509ISH9-type transposase NmIRS1. (287 aa)
Nmlp_2495Integrase family protein; Product: ABC-type transport system permease protein (nonfunctional). (428 aa)
Nmlp_2491IS1341-type transposase ISNamo20. (439 aa)
Nmlp_2167Integrase family protein. (368 aa)
Nmlp_1933ISH9-type transposase ISNamo1. (271 aa)
Nmlp_1905IS1341-type transposase ISNamo23. (411 aa)
Nmlp_1853IS1341-type transposase ISNamo21; Gene has been targetted by a transposon; locus_tag: Nmlp_1855; conceptual translation after in silico reconstruction: MSTDNSDDTTEHHAHEHRDVGGPGYPTPAAMRTESGREQTAYV MAPRVGMQNDGPGFVGVVDLDPASDTYSELIDTVEMPNKGDELHHFGWNACSSSCHAE GLSRQYLIVPGQRSSRIHVIDAEEPRDPEIVTVIEPEELFEYDLSAPHTVHCVPGGKI VISMLGDADGELPGGFLQLDQEDFSIDGRWEADRGAMEMNYDYWYQPRYDVLISSEWA APNTYYPGFDLDDVEAGNYGDSIHIWSWDDREHVQTLEFGDAGRIPLEVRMSHNPEET QGYVGAALSSNIIRFYESTDGAWEWDVVIDEDPREHEDWDMPVPPLIIDILLSLDDQY LFFSNWLHGDVRMYDVSDAANPRLVDRVWAGGLFGDRQEIQDKEIRGAPQMLQLSRDG TRLYWTTSLFSSWDNQFFPEMAEEGSLMFKADVFPDEGRLDL [...] (459 aa)
uvrDRepair helicase UvrD. (614 aa)
Nmlp_1751IS1341-type transposase ISNamo23. (411 aa)
Nmlp_1738Homolog to phage integrase. (336 aa)
Nmlp_1728ISH11-type transposase ISNamo4. (330 aa)
Nmlp_1646XerC/D-like integrase. (337 aa)
Nmlp_1635ISH9-type transposase ISNamo2; Gene has been targetted by a transposon; locus_tag: Nmlp_1634; product: sensor box histidine kinase (nonfunctional); conceptual translation after in silico reconstruction: MASEHERIDSHAVLDSLPDALFVVDRQRTISYANQRLCNVLNI SRIDLLDEPLAFLDQFVYEGFENLVSAIDEVLSGRQDDLRTEIETTLPEAAPVQQHIT VDARVTAADGNGISGALVVLRNVEEYHERQAQPRHEAQRFRTMFERHSAPMLLIDPDS GRIENANRSAVDFYGYDADRLYGMPIERINCHSPEEVSRKHKCAHRGDQNCFEFEHRL ASGETRAVEVHSSPIEIEGRTLLFSIVHDVTDRKESRRELRVFREAVAQAGHSVIITD VDGAIEYVNPAFEEVTGYDGDEIAGETPEVLNSGRRDPQFYEQLWETIRSGNVWEAEL VNQTKSGELYYAEHTIAPIVGDDGEITNFVAVQKDITERKLKQKRLSELH [...] (276 aa)
Nmlp_1621Integrase family protein. (400 aa)
CCT61390.1IS200-type transposase ISNamo18. (127 aa)
Nmlp_1510IS1341-type transposase ISNamo18. (411 aa)
Nmlp_1438IS1341-type transposase ISNamo22; Product: nitroreductase family protein (nonfunctional); part of the region does not belong to this CDS as coordinates speficy only the outer boundaries; gene has been targetted by a transposon. (445 aa)
rpa2Replication protein A. (471 aa)
Nmlp_1286IS200-type transposase ISNamo19. (130 aa)
Nmlp_1285IS1341-type transposase ISNamo19. (419 aa)
Nmlp_2597Integrase family protein. (424 aa)
Nmlp_2605ISH9-type transposase ISNamo1. (271 aa)
Nmlp_2572IS1341-type transposase ISNamo24; Gene has been targetted by a transposon; locus_tag: Nmlp_2571; product: small CPxCG-related zinc finger protein (nonfunctional); conceptual translation after in silico reconstruction: MSTTDLSTLGDCPRCSASVTSIDVLIEYKIDGQPAVYAVHAEC PGCQAVIKPA. (434 aa)
Nmlp_2651IS1341-type transposase ISNamo25. (410 aa)
Your Current Organism:
Natronomonas moolapensis
NCBI taxonomy Id: 268739
Other names: N. moolapensis 8.8.11, Natronomonas moolapensis 8.8.11, Natronomonas moolapensis DSM 18674, Natronomonas moolapensis JCM 14361, Natronomonas moolapensis str. 8.8.11, Natronomonas moolapensis strain 8.8.11, haloarchaeon CSW8.8.11
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.