(26 nodes) Butanoate metabolism network (Natronomonas moolapensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	hmgB	hydroxymethylglutaryl-CoA synthase. (445 aa)
	bdhA1	3-hydroxybutyrate dehydrogenase. (287 aa)
	sdhC	Succinate dehydrogenase subunit C; Deleted EC_number 1.3.99.1. (130 aa)
	sdhD	Succinate dehydrogenase subunit D; Deleted EC_number 1.3.99.1. (121 aa)
	sdhB	Succinate dehydrogenase subunit B; Deleted EC_number 1.3.99.1. (285 aa)
	sdhA1	Succinate dehydrogenase subunit A; Deleted EC_number 1.3.99.1. (611 aa)
	gabD	Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (534 aa)
	fadA2	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (237 aa)
	acaB1	acetyl-CoA C-acetyltransferase catalytic subunit. (384 aa)
	bdhA2	3-hydroxybutyrate dehydrogenase. (289 aa)
	korB2	Oxoglutarate--ferredoxin oxidoreductase beta subunit. (289 aa)
	acaB3	acetyl-CoA C-acyltransferase. (392 aa)
	hbd	3-hydroxyacyl-CoA dehydrogenase. (287 aa)
	ilvB	Acetolactate synthase large subunit. (580 aa)
	ilvN	Acetolactate synthase small subunit. (211 aa)
	porB	Pyruvate--ferredoxin oxidoreductase beta subunit. (312 aa)
	porA	Pyruvate--ferredoxin oxidoreductase alpha subunit. (628 aa)
	acaB2	acetyl-CoA C-acetyltransferase. (388 aa)
	fadA4	Enoyl-CoA hydratase; Gene has frameshifts and lacks a central region; locus_tag: Nmlp_3329; product: IS1341-type transposase NmIRS28 (nonfunctional); Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
	sdhA2	Succinate dehydrogenase subunit A; Deleted EC_number 1.3.99.1. (596 aa)
	korA	Oxoglutarate--ferredoxin oxidoreductase alpha subunit. (587 aa)
	korB1	Oxoglutarate--ferredoxin oxidoreductase beta subunit. (289 aa)
	korB3	Oxoglutarate--ferredoxin oxidoreductase beta subunit. (287 aa)
	phaC	Poly(3-hydroxyalkanoate) synthase PhaC. (473 aa)
	phaE	Poly(3-hydroxyalkanoate) synthase PhaE. (181 aa)
	phaJ	(R)-specific enoyl-CoA hydratase. (215 aa)

Your Current Organism:

Natronomonas moolapensis

NCBI taxonomy Id: 268739
Other names: N. moolapensis 8.8.11, Natronomonas moolapensis 8.8.11, Natronomonas moolapensis DSM 18674, Natronomonas moolapensis JCM 14361, Natronomonas moolapensis str. 8.8.11, Natronomonas moolapensis strain 8.8.11, haloarchaeon CSW8.8.11

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
acaB1	acaB2	Nmlp_2716	Nmlp_3314	acetyl-CoA C-acetyltransferase catalytic subunit.	acetyl-CoA C-acetyltransferase.	0.908
acaB1	acaB3	Nmlp_2716	Nmlp_3125	acetyl-CoA C-acetyltransferase catalytic subunit.	acetyl-CoA C-acyltransferase.	0.911
acaB1	fadA2	Nmlp_2716	Nmlp_2207	acetyl-CoA C-acetyltransferase catalytic subunit.	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.849
acaB1	fadA4	Nmlp_2716	Nmlp_3330	acetyl-CoA C-acetyltransferase catalytic subunit.	Enoyl-CoA hydratase; Gene has frameshifts and lacks a central region; locus_tag: Nmlp_3329; product: IS1341-type transposase NmIRS28 (nonfunctional); Belongs to the enoyl-CoA hydratase/isomerase family.	0.800
acaB1	hbd	Nmlp_2716	Nmlp_3132	acetyl-CoA C-acetyltransferase catalytic subunit.	3-hydroxyacyl-CoA dehydrogenase.	0.980
acaB1	hmgB	Nmlp_2716	Nmlp_1619	acetyl-CoA C-acetyltransferase catalytic subunit.	hydroxymethylglutaryl-CoA synthase.	0.992
acaB1	korA	Nmlp_2716	Nmlp_3489	acetyl-CoA C-acetyltransferase catalytic subunit.	Oxoglutarate--ferredoxin oxidoreductase alpha subunit.	0.907
acaB1	korB1	Nmlp_2716	Nmlp_3490	acetyl-CoA C-acetyltransferase catalytic subunit.	Oxoglutarate--ferredoxin oxidoreductase beta subunit.	0.902
acaB1	korB2	Nmlp_2716	Nmlp_3098	acetyl-CoA C-acetyltransferase catalytic subunit.	Oxoglutarate--ferredoxin oxidoreductase beta subunit.	0.902
acaB1	korB3	Nmlp_2716	Nmlp_3698	acetyl-CoA C-acetyltransferase catalytic subunit.	Oxoglutarate--ferredoxin oxidoreductase beta subunit.	0.902
acaB1	phaJ	Nmlp_2716	Nmlp_3929	acetyl-CoA C-acetyltransferase catalytic subunit.	(R)-specific enoyl-CoA hydratase.	0.539
acaB1	porA	Nmlp_2716	Nmlp_3265	acetyl-CoA C-acetyltransferase catalytic subunit.	Pyruvate--ferredoxin oxidoreductase alpha subunit.	0.907
acaB1	porB	Nmlp_2716	Nmlp_3264	acetyl-CoA C-acetyltransferase catalytic subunit.	Pyruvate--ferredoxin oxidoreductase beta subunit.	0.902
acaB1	sdhB	Nmlp_2716	Nmlp_1980	acetyl-CoA C-acetyltransferase catalytic subunit.	Succinate dehydrogenase subunit B; Deleted EC_number 1.3.99.1.	0.447
acaB2	acaB1	Nmlp_3314	Nmlp_2716	acetyl-CoA C-acetyltransferase.	acetyl-CoA C-acetyltransferase catalytic subunit.	0.908
acaB2	acaB3	Nmlp_3314	Nmlp_3125	acetyl-CoA C-acetyltransferase.	acetyl-CoA C-acyltransferase.	0.911
acaB2	fadA2	Nmlp_3314	Nmlp_2207	acetyl-CoA C-acetyltransferase.	enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.849
acaB2	fadA4	Nmlp_3314	Nmlp_3330	acetyl-CoA C-acetyltransferase.	Enoyl-CoA hydratase; Gene has frameshifts and lacks a central region; locus_tag: Nmlp_3329; product: IS1341-type transposase NmIRS28 (nonfunctional); Belongs to the enoyl-CoA hydratase/isomerase family.	0.800
acaB2	hbd	Nmlp_3314	Nmlp_3132	acetyl-CoA C-acetyltransferase.	3-hydroxyacyl-CoA dehydrogenase.	0.982
acaB2	hmgB	Nmlp_3314	Nmlp_1619	acetyl-CoA C-acetyltransferase.	hydroxymethylglutaryl-CoA synthase.	0.992

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