STRINGSTRING
pabB pabB pabA pabA ftsY ftsY dppF dppF dppD dppD dppC dppC dppB dppB dppA dppA secY secY trpG3 trpG3 trpE1 trpE1 livM1 livM1 livH1 livH1 Nmlp_2650 Nmlp_2650 srp54 srp54 urtD urtD livF2 livF2 livG2 livG2 livM2 livM2 livH2 livH2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pabBAminodeoxychorismate synthase component 1. (503 aa)
pabAAminodeoxychorismate synthase component 2. (205 aa)
ftsYSignal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (359 aa)
dppFABC-type transport system ATP-binding protein (probable substrate dipeptide/oligopeptide). (460 aa)
dppDABC-type transport system ATP-binding protein (probable substrate dipeptide/oligopeptide). (353 aa)
dppCABC-type transport system permease protein (probable substrate dipeptide/oligopeptide). (420 aa)
dppBABC-type transport system permease protein (probable substrate dipeptide/oligopeptide). (324 aa)
dppAABC-type transport system periplasmic substrate-binding protein (probable substrate dipeptide/oligopeptide). (637 aa)
secYProtein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (492 aa)
trpG3Anthranilate synthase component 2. (194 aa)
trpE1Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] (529 aa)
livM1ABC-type transport system permease protein (probable substrate branched-chain amino acids). (456 aa)
livH1ABC-type transport system permease protein (probable substrate branched-chain amino acids). (374 aa)
Nmlp_2650Probable secreted glycoprotein. (4220 aa)
srp54Signal recognition particle 54K protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (464 aa)
urtDABC-type transport system ATP-binding protein (probable substrate urea/short-chain amides). (257 aa)
livF2ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids). (247 aa)
livG2ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids). (251 aa)
livM2ABC-type transport system permease protein (probable substrate branched-chain amino acids). (360 aa)
livH2ABC-type transport system permease protein (probable substrate branched-chain amino acids). (311 aa)
Your Current Organism:
Natronomonas moolapensis
NCBI taxonomy Id: 268739
Other names: N. moolapensis 8.8.11, Natronomonas moolapensis 8.8.11, Natronomonas moolapensis DSM 18674, Natronomonas moolapensis JCM 14361, Natronomonas moolapensis str. 8.8.11, Natronomonas moolapensis strain 8.8.11, haloarchaeon CSW8.8.11
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