41 items (Rhodospirillum rubrum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rru_A0588	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (338 aa)
	Rru_A0589	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (330 aa)
	Rru_A0590	Binding-protein-dependent transport systems inner membrane component. (302 aa)
	Rru_A0591	Binding-protein-dependent transport systems inner membrane component. (308 aa)
	Rru_A0592	Extracellular solute-binding protein, family 5. (545 aa)
	Rru_A0799	Extracellular solute-binding protein, family 5. (531 aa)
	Rru_A0800	Binding-protein-dependent transport systems inner membrane component. (356 aa)
	Rru_A0801	Binding-protein-dependent transport systems inner membrane component. (296 aa)
	Rru_A0802	ABC transporter component. (276 aa)
	Rru_A0803	ABC transporter component. (252 aa)
	Rru_A0979	Extracellular solute-binding protein, family 5. (530 aa)
	Rru_A0980	Binding-protein-dependent transport systems inner membrane component. (313 aa)
	Rru_A0981	Binding-protein-dependent transport systems inner membrane component. (314 aa)
	Rru_A0982	ABC transporter component; Belongs to the ABC transporter superfamily. (541 aa)
	Rru_A0984	Peptidase M20D, amidohydrolase. (397 aa)
	Rru_A1917	Extracellular solute-binding protein, family 5. (518 aa)
	Rru_A1918	Binding-protein-dependent transport systems inner membrane component. (333 aa)
	Rru_A1919	Binding-protein-dependent transport systems inner membrane component. (310 aa)
	Rru_A1920	ABC transporter component. (276 aa)
	Rru_A1921	ABC transporter component. (262 aa)
	Rru_A2010	Aminotransferase, class V. (388 aa)
	Rru_A2011	ABC transporter component; Belongs to the ABC transporter superfamily. (560 aa)
	Rru_A2012	Binding-protein-dependent transport systems inner membrane component. (276 aa)
	Rru_A2013	Binding-protein-dependent transport systems inner membrane component. (326 aa)
	Rru_A2014	Twin-arginine translocation pathway signal. (534 aa)
	Rru_A2174	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (326 aa)
	Rru_A2175	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (344 aa)
	Rru_A2176	Binding-protein-dependent transport systems inner membrane component. (324 aa)
	Rru_A2177	Binding-protein-dependent transport systems inner membrane component. (363 aa)
	Rru_A2178	Extracellular solute-binding protein, family 5. (561 aa)
	nikE	ABC transporter component; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (277 aa)
	nikD	ABC transporter component; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (261 aa)
	NikC	Binding-protein-dependent transport systems inner membrane component. (299 aa)
	Rru_A2276	Binding-protein-dependent transport systems inner membrane component. (314 aa)
	Rru_A2277	Nickel ABC transporter, periplasmic nickel-binding. (553 aa)
	Rru_A2356	Extracellular solute-binding protein, family 5. (529 aa)
	Rru_A2357	Binding-protein-dependent transport systems inner membrane component. (336 aa)
	Rru_A2358	Binding-protein-dependent transport systems inner membrane component. (325 aa)
	Rru_A2359	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (342 aa)
	DppF	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (344 aa)
	Rru_A2474	Extracellular solute-binding protein, family 5. (525 aa)

Your Current Organism:

Rhodospirillum rubrum

NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DppF	NikC	Rru_A2360	Rru_A2275	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.983
DppF	Rru_A0588	Rru_A2360	Rru_A0588	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.584
DppF	Rru_A0589	Rru_A2360	Rru_A0589	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.623
DppF	Rru_A0590	Rru_A2360	Rru_A0590	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.982
DppF	Rru_A0591	Rru_A2360	Rru_A0591	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.813
DppF	Rru_A0592	Rru_A2360	Rru_A0592	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Extracellular solute-binding protein, family 5.	0.564
DppF	Rru_A0800	Rru_A2360	Rru_A0800	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.759
DppF	Rru_A0801	Rru_A2360	Rru_A0801	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.977
DppF	Rru_A0802	Rru_A2360	Rru_A0802	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	ABC transporter component.	0.655
DppF	Rru_A0980	Rru_A2360	Rru_A0980	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.825
DppF	Rru_A0981	Rru_A2360	Rru_A0981	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.975
DppF	Rru_A1918	Rru_A2360	Rru_A1918	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.733
DppF	Rru_A1919	Rru_A2360	Rru_A1919	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.975
DppF	Rru_A1920	Rru_A2360	Rru_A1920	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	ABC transporter component.	0.637
DppF	Rru_A2012	Rru_A2360	Rru_A2012	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.980
DppF	Rru_A2013	Rru_A2360	Rru_A2013	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.778
DppF	Rru_A2175	Rru_A2360	Rru_A2175	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.641
DppF	Rru_A2176	Rru_A2360	Rru_A2176	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.835
DppF	Rru_A2177	Rru_A2360	Rru_A2177	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.877
DppF	Rru_A2178	Rru_A2360	Rru_A2178	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Extracellular solute-binding protein, family 5.	0.469

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