10 items (Rhodospirillum rubrum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Others

textmining

co-expression

protein homology

Your Input:
	Rru_A0799	Extracellular solute-binding protein, family 5. (531 aa)
	Rru_A0800	Binding-protein-dependent transport systems inner membrane component. (356 aa)
	Rru_A0801	Binding-protein-dependent transport systems inner membrane component. (296 aa)
	Rru_A0802	ABC transporter component. (276 aa)
	Rru_A0803	ABC transporter component. (252 aa)
	Rru_A1917	Extracellular solute-binding protein, family 5. (518 aa)
	Rru_A1918	Binding-protein-dependent transport systems inner membrane component. (333 aa)
	Rru_A1919	Binding-protein-dependent transport systems inner membrane component. (310 aa)
	Rru_A1920	ABC transporter component. (276 aa)
	Rru_A1921	ABC transporter component. (262 aa)

Your Current Organism:

Rhodospirillum rubrum

NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Rru_A0799	Rru_A0800	Extracellular solute-binding protein, family 5.	Binding-protein-dependent transport systems inner membrane component.	0.969
Rru_A0799	Rru_A0801	Extracellular solute-binding protein, family 5.	Binding-protein-dependent transport systems inner membrane component.	0.967
Rru_A0799	Rru_A0802	Extracellular solute-binding protein, family 5.	ABC transporter component.	0.945
Rru_A0799	Rru_A0803	Extracellular solute-binding protein, family 5.	ABC transporter component.	0.939
Rru_A0799	Rru_A1917	Extracellular solute-binding protein, family 5.	Extracellular solute-binding protein, family 5.	0.403
Rru_A0799	Rru_A1918	Extracellular solute-binding protein, family 5.	Binding-protein-dependent transport systems inner membrane component.	0.873
Rru_A0799	Rru_A1919	Extracellular solute-binding protein, family 5.	Binding-protein-dependent transport systems inner membrane component.	0.864
Rru_A0799	Rru_A1920	Extracellular solute-binding protein, family 5.	ABC transporter component.	0.821
Rru_A0799	Rru_A1921	Extracellular solute-binding protein, family 5.	ABC transporter component.	0.797
Rru_A0800	Rru_A0799	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 5.	0.969
Rru_A0800	Rru_A0801	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.969
Rru_A0800	Rru_A0802	Binding-protein-dependent transport systems inner membrane component.	ABC transporter component.	0.968
Rru_A0800	Rru_A0803	Binding-protein-dependent transport systems inner membrane component.	ABC transporter component.	0.941
Rru_A0800	Rru_A1917	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 5.	0.873
Rru_A0800	Rru_A1919	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.870
Rru_A0800	Rru_A1920	Binding-protein-dependent transport systems inner membrane component.	ABC transporter component.	0.871
Rru_A0800	Rru_A1921	Binding-protein-dependent transport systems inner membrane component.	ABC transporter component.	0.778
Rru_A0801	Rru_A0799	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 5.	0.967
Rru_A0801	Rru_A0800	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.969
Rru_A0801	Rru_A0802	Binding-protein-dependent transport systems inner membrane component.	ABC transporter component.	0.996

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