STRINGSTRING
Rru_A0189 Rru_A0189 Rru_A3711 Rru_A3711 secF-2 secF-2 Rru_A3561 Rru_A3561 Rru_A3474 Rru_A3474 Rru_A3439 Rru_A3439 Rru_A3433 Rru_A3433 Rru_A3405 Rru_A3405 Rru_A3169 Rru_A3169 Rru_A2942 Rru_A2942 Rru_A2898 Rru_A2898 Rru_A2897 Rru_A2897 Rru_A2803 Rru_A2803 Rru_A2801 Rru_A2801 secE secE secY secY Rru_A2647 Rru_A2647 Rru_A2474 Rru_A2474 msrA msrA Rru_A2358 Rru_A2358 Rru_A2357 Rru_A2357 Rru_A2356 Rru_A2356 Rru_A2340 Rru_A2340 Rru_A2339 Rru_A2339 Rru_A2277 Rru_A2277 Rru_A2276 Rru_A2276 NikC NikC Rru_A2195 Rru_A2195 Rru_A2178 Rru_A2178 Rru_A2177 Rru_A2177 Rru_A2176 Rru_A2176 Rru_A2014 Rru_A2014 Rru_A2013 Rru_A2013 Rru_A2012 Rru_A2012 Rru_A1919 Rru_A1919 Rru_A1918 Rru_A1918 Rru_A1917 Rru_A1917 Rru_A1888 Rru_A1888 Rru_A1880 Rru_A1880 Rru_A1879 Rru_A1879 Rru_A1782 Rru_A1782 secD secD secF secF Rru_A1760 Rru_A1760 Rru_A1418 Rru_A1418 Rru_A1214 Rru_A1214 Rru_A0981 Rru_A0981 Rru_A0980 Rru_A0980 Rru_A0979 Rru_A0979 Rru_A0927 Rru_A0927 Rru_A0882 Rru_A0882 Rru_A0881 Rru_A0881 Rru_A0864 Rru_A0864 Rru_A0863 Rru_A0863 Rru_A0844 Rru_A0844 Rru_A0843 Rru_A0843 Rru_A0801 Rru_A0801 Rru_A0800 Rru_A0800 Rru_A0799 Rru_A0799 Rru_A0591 Rru_A0591 Rru_A0590 Rru_A0590 Rru_A0351 Rru_A0351 Rru_A0301 Rru_A0301 secA secA Rru_A0188 Rru_A0188
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rru_A0189ABC transporter, transmembrane region. (593 aa)
Rru_A3711Thioredoxin-related. (312 aa)
secF-2Protein translocase subunit secD / protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (853 aa)
Rru_A3561ABC transporter, transmembrane region. (579 aa)
Rru_A3474Bacterioferritin; Belongs to the bacterioferritin family. (161 aa)
Rru_A3439FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (345 aa)
Rru_A3433Thioredoxin; Belongs to the thioredoxin family. (104 aa)
Rru_A3405Formaldehyde dehydrogenase (glutathione); Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (372 aa)
Rru_A3169ABC transporter component; Belongs to the ABC transporter superfamily. (553 aa)
Rru_A2942ABC transporter, transmembrane region. (605 aa)
Rru_A2898Thioredoxin reductase. (314 aa)
Rru_A2897Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen. (204 aa)
Rru_A2803Putative thioredoxin. (172 aa)
Rru_A2801Thiol-disulfide interchange protein. (153 aa)
secEProtein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (65 aa)
secYProtein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (447 aa)
Rru_A2647Hypothetical protein. (376 aa)
Rru_A2474Extracellular solute-binding protein, family 5. (525 aa)
msrAProtein-methionine-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (160 aa)
Rru_A2358Binding-protein-dependent transport systems inner membrane component. (325 aa)
Rru_A2357Binding-protein-dependent transport systems inner membrane component. (336 aa)
Rru_A2356Extracellular solute-binding protein, family 5. (529 aa)
Rru_A2340ABC transporter, transmembrane region. (603 aa)
Rru_A2339ABC transporter component. (582 aa)
Rru_A2277Nickel ABC transporter, periplasmic nickel-binding. (553 aa)
Rru_A2276Binding-protein-dependent transport systems inner membrane component. (314 aa)
NikCBinding-protein-dependent transport systems inner membrane component. (299 aa)
Rru_A2195Bacterioferritin; Iron-storage protein. (159 aa)
Rru_A2178Extracellular solute-binding protein, family 5. (561 aa)
Rru_A2177Binding-protein-dependent transport systems inner membrane component. (363 aa)
Rru_A2176Binding-protein-dependent transport systems inner membrane component. (324 aa)
Rru_A2014Twin-arginine translocation pathway signal. (534 aa)
Rru_A2013Binding-protein-dependent transport systems inner membrane component. (326 aa)
Rru_A2012Binding-protein-dependent transport systems inner membrane component. (276 aa)
Rru_A1919Binding-protein-dependent transport systems inner membrane component. (310 aa)
Rru_A1918Binding-protein-dependent transport systems inner membrane component. (333 aa)
Rru_A1917Extracellular solute-binding protein, family 5. (518 aa)
Rru_A1888Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (146 aa)
Rru_A1880Pyruvate dehydrogenase beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (468 aa)
Rru_A1879Dihydrolipoamide acetyltransferase, long form; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (440 aa)
Rru_A1782Copper/Zinc superoxide dismutase. (156 aa)
secDSecD export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (488 aa)
secFProtein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (351 aa)
Rru_A1760Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (227 aa)
Rru_A1418Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)
Rru_A12142-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (431 aa)
Rru_A0981Binding-protein-dependent transport systems inner membrane component. (314 aa)
Rru_A0980Binding-protein-dependent transport systems inner membrane component. (313 aa)
Rru_A0979Extracellular solute-binding protein, family 5. (530 aa)
Rru_A0927Luciferase-like. (333 aa)
Rru_A0882ABC transporter, transmembrane region. (592 aa)
Rru_A0881ABC transporter component. (589 aa)
Rru_A0864ABC transporter, transmembrane region. (603 aa)
Rru_A0863ABC transporter, transmembrane region. (565 aa)
Rru_A0844ABC transporter component. (569 aa)
Rru_A0843ABC transporter component. (577 aa)
Rru_A0801Binding-protein-dependent transport systems inner membrane component. (296 aa)
Rru_A0800Binding-protein-dependent transport systems inner membrane component. (356 aa)
Rru_A0799Extracellular solute-binding protein, family 5. (531 aa)
Rru_A0591Binding-protein-dependent transport systems inner membrane component. (308 aa)
Rru_A0590Binding-protein-dependent transport systems inner membrane component. (302 aa)
Rru_A0351Conserved hypothetical protein. (200 aa)
Rru_A0301Alkylhydroperoxidase AhpD core; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (137 aa)
secAProtein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (931 aa)
Rru_A0188ABC transporter, transmembrane region. (576 aa)
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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