Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaG | ftsZ-2 | Mbar_A0959 | Mbar_A0618 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.410 |
| dnaG | rpl21e | Mbar_A0959 | Mbar_A3231 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.637 |
| dnaG | rpl29 | Mbar_A0959 | Mbar_A0103 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.526 |
| dnaG | rps27ae | Mbar_A0959 | Mbar_A0281 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | SSU ribosomal protein S27AE; Belongs to the eukaryotic ribosomal protein eS31 family. | 0.414 |
| ftsZ | rpl29 | Mbar_A0191 | Mbar_A0103 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.403 |
| ftsZ-2 | dnaG | Mbar_A0618 | Mbar_A0959 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.410 |
| rpl21e | dnaG | Mbar_A3231 | Mbar_A0959 | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.637 |
| rpl21e | rpl29 | Mbar_A3231 | Mbar_A0103 | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
| rpl21e | rpl39e | Mbar_A3231 | Mbar_A0457 | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | LSU ribosomal protein L39E; Belongs to the eukaryotic ribosomal protein eL39 family. | 0.994 |
| rpl21e | rps14 | Mbar_A3231 | Mbar_A0096 | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. | 0.999 |
| rpl21e | rps27ae | Mbar_A3231 | Mbar_A0281 | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | SSU ribosomal protein S27AE; Belongs to the eukaryotic ribosomal protein eS31 family. | 0.976 |
| rpl29 | dnaG | Mbar_A0103 | Mbar_A0959 | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.526 |
| rpl29 | ftsZ | Mbar_A0103 | Mbar_A0191 | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.403 |
| rpl29 | rpl21e | Mbar_A0103 | Mbar_A3231 | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.999 |
| rpl29 | rpl39e | Mbar_A0103 | Mbar_A0457 | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | LSU ribosomal protein L39E; Belongs to the eukaryotic ribosomal protein eL39 family. | 0.994 |
| rpl29 | rps14 | Mbar_A0103 | Mbar_A0096 | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. | 0.999 |
| rpl29 | rps27ae | Mbar_A0103 | Mbar_A0281 | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | SSU ribosomal protein S27AE; Belongs to the eukaryotic ribosomal protein eS31 family. | 0.990 |
| rpl39e | rpl21e | Mbar_A0457 | Mbar_A3231 | LSU ribosomal protein L39E; Belongs to the eukaryotic ribosomal protein eL39 family. | LSU ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.994 |
| rpl39e | rpl29 | Mbar_A0457 | Mbar_A0103 | LSU ribosomal protein L39E; Belongs to the eukaryotic ribosomal protein eL39 family. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.994 |
| rpl39e | rps14 | Mbar_A0457 | Mbar_A0096 | LSU ribosomal protein L39E; Belongs to the eukaryotic ribosomal protein eL39 family. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles. | 0.997 |
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