(42 nodes) Fatty acid metabolic process, and Enoyl-CoA hydratase/isomerase network (Thermobifida fusca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Tfu_0067	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase. (256 aa)
	Tfu_0068	Putative acyl-CoA dehydrogenase. (391 aa)
	Tfu_0069	Putative transcriptional regulator. (202 aa)
	Tfu_0072	Putative quinone oxidoreductase. (328 aa)
	Tfu_0253	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (380 aa)
	Tfu_0276	Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (254 aa)
	Tfu_0360	Putative oxidoreductase. (331 aa)
	Tfu_0361	Oxidoreductase, short chain dehydrogenase/reductase family. (264 aa)
	Tfu_0501	Enoyl-CoA hydratase. (263 aa)
	Tfu_0593	Electron transfer flavoprotein, beta subunit. (259 aa)
	Tfu_0594	Electron transfer flavoprotein, alpha subunit. (313 aa)
	Tfu_0875	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
	Tfu_0946	butyryl-CoA dehydrogenase. (384 aa)
	Tfu_0958	Conserved hypothetical protein. (151 aa)
	Tfu_1031	Long-chain fatty-acid-CoA ligase. (598 aa)
	Tfu_1259	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (250 aa)
	Tfu_1278	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
	Tfu_1280	Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
	Tfu_1281	butyryl-CoA dehydrogenase. (387 aa)
	Tfu_1282	Putative acyl-CoA dehydrogenase. (392 aa)
	Tfu_1284	Putative acyl-CoA dehydrogenase. (388 aa)
	Tfu_1379	Putative acyl-CoA dehydrogenase. (409 aa)
	Tfu_1512	Putative acyl-CoA dehydrogenase. (382 aa)
	Tfu_1520	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
	Tfu_1544	Putative enoyl-CoA hydratase/isomerase family protein. (223 aa)
	Tfu_1647	acyl-CoA dehydrogenase. (385 aa)
	Tfu_1682	Putative short chain dehydrogenase. (252 aa)
	Tfu_1733	Putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase. (614 aa)
	Tfu_1777	Putative acyl-CoA dehydrogenase. (383 aa)
	Tfu_1844	Conserved hypothetical protein. (339 aa)
	Tfu_1878	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (275 aa)
	Tfu_1903	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
	Tfu_1904	Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase. (697 aa)
	Tfu_1998	Putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase. (508 aa)
	Tfu_1999	acyl-CoA dehydrogenase. (391 aa)
	Tfu_2158	Putative long-chain-fatty-acid-CoA ligase. (515 aa)
	Tfu_2248	Putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase. (550 aa)
	Tfu_2309	Putative acyl-CoA dehydrogenase. (411 aa)
	Tfu_2310	Putative acyl-CoA dehydrogenase. (377 aa)
	Tfu_2394	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
	Tfu_2399	3-hydroxyacyl-CoA dehydrogenase. (398 aa)
	Tfu_2485	acyl-CoA dehydrogenase. (398 aa)

Your Current Organism:

Thermobifida fusca

NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Tfu_0067	Tfu_0068	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Putative acyl-CoA dehydrogenase.	0.692
Tfu_0067	Tfu_0253	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.743
Tfu_0067	Tfu_0276	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.941
Tfu_0067	Tfu_0501	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Enoyl-CoA hydratase.	0.923
Tfu_0067	Tfu_0875	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.817
Tfu_0067	Tfu_0946	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	butyryl-CoA dehydrogenase.	0.938
Tfu_0067	Tfu_1259	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.924
Tfu_0067	Tfu_1278	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.635
Tfu_0067	Tfu_1280	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.418
Tfu_0067	Tfu_1281	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	butyryl-CoA dehydrogenase.	0.410
Tfu_0067	Tfu_1282	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Putative acyl-CoA dehydrogenase.	0.938
Tfu_0067	Tfu_1284	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Putative acyl-CoA dehydrogenase.	0.945
Tfu_0067	Tfu_1379	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Putative acyl-CoA dehydrogenase.	0.692
Tfu_0067	Tfu_1512	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Putative acyl-CoA dehydrogenase.	0.692
Tfu_0067	Tfu_1520	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.743
Tfu_0067	Tfu_1647	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	acyl-CoA dehydrogenase.	0.846
Tfu_0067	Tfu_1777	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Putative acyl-CoA dehydrogenase.	0.493
Tfu_0067	Tfu_1903	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.635
Tfu_0067	Tfu_1904	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.	0.732
Tfu_0067	Tfu_1999	Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase.	acyl-CoA dehydrogenase.	0.938