STRINGSTRING
Tfu_0067 Tfu_0067 pckG pckG nth nth Tfu_0153 Tfu_0153 Tfu_0188 Tfu_0188 Tfu_0193 Tfu_0193 Tfu_0226 Tfu_0226 ectC ectC Tfu_0341 Tfu_0341 moaC moaC Tfu_0396 Tfu_0396 eno eno fumC fumC Tfu_0501 Tfu_0501 Tfu_0534 Tfu_0534 Tfu_0562 Tfu_0562 Tfu_0566 Tfu_0566 leuC leuC leuD leuD mutM mutM Tfu_0694 Tfu_0694 dapA dapA Tfu_0958 Tfu_0958 Tfu_1039 Tfu_1039 pyrF pyrF Tfu_1064 Tfu_1064 ribBA ribBA aroC aroC aroB aroB hisB hisB hisH hisH hisF hisF trpC trpC trpB trpB trpA trpA Tfu_1217 Tfu_1217 Tfu_1259 Tfu_1259 Tfu_1285 Tfu_1285 Tfu_1286 Tfu_1286 Tfu_1297 Tfu_1297 Tfu_1299 Tfu_1299 Tfu_1312 Tfu_1312 Tfu_1313 Tfu_1313 moaA moaA Tfu_1377 Tfu_1377 menB menB menC-2 menC-2 Tfu_1454 Tfu_1454 Tfu_1460 Tfu_1460 Tfu_1483 Tfu_1483 Tfu_1485 Tfu_1485 rlpA rlpA Tfu_1547 Tfu_1547 aroQ aroQ Tfu_1715 Tfu_1715 Tfu_1718 Tfu_1718 Tfu_1720 Tfu_1720 Tfu_1741 Tfu_1741 panD panD Tfu_1890 Tfu_1890 psd psd hemE hemE Tfu_1925 Tfu_1925 hemH hemH Tfu_1966 Tfu_1966 Tfu_2046 Tfu_2046 argH argH mltG mltG pdxT pdxT pdxS pdxS Tfu_2132 Tfu_2132 Tfu_2168 Tfu_2168 ilvD ilvD cobD cobD murQ murQ Tfu_2354 Tfu_2354 Tfu_2357 Tfu_2357 Tfu_2390 Tfu_2390 Tfu_2395 Tfu_2395 Tfu_2423 Tfu_2423 lysA lysA Tfu_2430 Tfu_2430 Tfu_2519 Tfu_2519 purK purK Tfu_2552 Tfu_2552 ppc ppc Tfu_2560 Tfu_2560 nnrD nnrD Tfu_2666 Tfu_2666 Tfu_2727 Tfu_2727 Tfu_2730 Tfu_2730 Tfu_2731 Tfu_2731 Tfu_2891 Tfu_2891 ispF ispF Tfu_2970 Tfu_2970 Tfu_3010 Tfu_3010 Tfu_3014 Tfu_3014 pheA pheA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tfu_0067Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase. (256 aa)
pckGPhosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. (604 aa)
nthEndonuclease III / DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (258 aa)
Tfu_0153Pectate lyase/Amb allergen. (449 aa)
Tfu_01882-keto-3-deoxy-phosphogluconate aldolase. (210 aa)
Tfu_0193Similar to Carbonic anhydrases/acetyltransferases isoleucine patch superfamily. (205 aa)
Tfu_0226L-threonine synthase. (428 aa)
ectCPutative condensing enzyme; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant. (134 aa)
Tfu_0341citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (318 aa)
moaCGTP cyclohydrolase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (162 aa)
Tfu_0396Conserved hypothetical protein. (186 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (427 aa)
fumCFumarase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (463 aa)
Tfu_0501Enoyl-CoA hydratase. (263 aa)
Tfu_0534Deoxyribodipyrimidine photo-lyase type I; Belongs to the DNA photolyase family. (419 aa)
Tfu_0562Malate dehydrogenase (oxaloacetate decarboxylating). (428 aa)
Tfu_05662-oxoglutarate dehydrogenase E1 component. (1214 aa)
leuC3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (465 aa)
leuD3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (195 aa)
mutMDNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (296 aa)
Tfu_0694Putative DNA repair hydrolase; Belongs to the FPG family. (292 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (325 aa)
Tfu_0958Conserved hypothetical protein. (151 aa)
Tfu_10393-deoxy-D-arabinoheptulosonate-7-phosphate synthase. (348 aa)
pyrFOrotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (233 aa)
Tfu_1064Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (412 aa)
ribBA3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. (410 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (406 aa)
aroB3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. (368 aa)
hisBImidazoleglycerol-phosphate dehydratase. (197 aa)
hisHImidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (211 aa)
hisFImidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (256 aa)
trpCIndole-3-glycerol phosphate synthase; Belongs to the TrpC family. (268 aa)
trpBTryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (412 aa)
trpATryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (270 aa)
Tfu_1217Putative cyclase II. (109 aa)
Tfu_1259Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (250 aa)
Tfu_1285citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (302 aa)
Tfu_1286Possible dehydratase, MaoC family. (159 aa)
Tfu_1297Amidohydrolase family protein. (262 aa)
Tfu_1299Dihydroxynaphthoic acid synthase; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
Tfu_1312Conserved hypothetical protein. (170 aa)
Tfu_1313Putative citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. (275 aa)
moaAGTP cyclohydrolase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (329 aa)
Tfu_1377Isocitrate lyase. (429 aa)
menB1,4-Dihydroxy-2-naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). (279 aa)
menC-2o-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (317 aa)
Tfu_1454Hypothetical protein. (129 aa)
Tfu_1460Conserved hypothetical protein. (735 aa)
Tfu_1483Conserved hypothetical protein. (152 aa)
Tfu_1485Conserved hypothetical protein. (134 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (233 aa)
Tfu_1547Pterin-4-alpha-carbinolamine dehydratase. (94 aa)
aroQ3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (149 aa)
Tfu_1715Dihydrodipicolinate synthase. (288 aa)
Tfu_1718Putative dihydrodipicolinate synthase; Belongs to the DapA family. (301 aa)
Tfu_1720Conserved hypothetical protein. (388 aa)
Tfu_1741L-threonine ammonia-lyase. (310 aa)
panDL-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (137 aa)
Tfu_1890Putative secreted protein. (255 aa)
psdPhosphatidylserine decarboxylase-related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (217 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (361 aa)
Tfu_1925Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (916 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (343 aa)
Tfu_1966Protein of unknown function UPF0047. (142 aa)
Tfu_2046Conserved hypothetical protein. (308 aa)
argHArgininosuccinate lyase. (476 aa)
mltGPutative integral membrane protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (685 aa)
pdxTPutative glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (201 aa)
pdxSVitamin B6 biosynthesis protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (362 aa)
Tfu_2132Carbonic anhydrase, putative. (167 aa)
Tfu_2168Pectate lyase. (512 aa)
ilvDDihydroxyacid dehydratase; Belongs to the IlvD/Edd family. (625 aa)
cobDAdenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (322 aa)
murQPutative phophosugar-binding protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (304 aa)
Tfu_2354Conserved hypothetical protein. (134 aa)
Tfu_2357Conserved hypothetical protein. (401 aa)
Tfu_2390Malate dehydrogenase (oxaloacetate decarboxylating). (470 aa)
Tfu_2395methylmalonyl-CoA epimerase. (147 aa)
Tfu_2423L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (354 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (461 aa)
Tfu_2430Conserved hypothetical protein. (229 aa)
Tfu_2519FO synthase subunit 1 / FO synthase subunit 2. (871 aa)
purKPhosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). (385 aa)
Tfu_2552Adenylate cyclase. (336 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (875 aa)
Tfu_2560Conserved hypothetical protein. (149 aa)
nnrDProtein of unknown function UPF0031:YjeF-related protein, N-terminal; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hyd [...] (490 aa)
Tfu_2666Conserved hypothetical protein; Belongs to the UPF0336 family. (152 aa)
Tfu_2727Protein of unknown function 1935; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. (163 aa)
Tfu_2730Porphobilinogen synthase; Belongs to the ALAD family. (327 aa)
Tfu_2731uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase. (563 aa)
Tfu_2891Dihydroneopterin aldolase family:Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (126 aa)
ispFMECDP-synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (154 aa)
Tfu_2970Fructose-6-phosphate phosphoketolase. (792 aa)
Tfu_3010Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (340 aa)
Tfu_3014Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (435 aa)
pheAPrephenate dehydratase. (315 aa)
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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