STRINGSTRING
Tfu_0016 Tfu_0016 hisA hisA xylA xylA Tfu_2004 Tfu_2004 tpiA tpiA Tfu_2202 Tfu_2202 Tfu_2391 Tfu_2391 Tfu_2508 Tfu_2508
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tfu_0016Mannose-6-phosphate isomerase. (423 aa)
hisA1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. (245 aa)
xylAXylose isomerase; Belongs to the xylose isomerase family. (385 aa)
Tfu_2004Glucose-6-phosphate isomerase. (544 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (261 aa)
Tfu_2202Ribose/galactose isomerase:Ribose 5-phosphate isomerase, actinobacteria. (166 aa)
Tfu_2391Hypothetical protein. (240 aa)
Tfu_2508Conserved hypothetical protein. (369 aa)
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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