STRINGSTRING
Tfu_1867 Tfu_1867 Tfu_1871 Tfu_1871 Tfu_1998 Tfu_1998 Tfu_2158 Tfu_2158 Tfu_2245 Tfu_2245 Tfu_2248 Tfu_2248 Tfu_2808 Tfu_2808 acsA acsA Tfu_1031 Tfu_1031 Tfu_1300 Tfu_1300
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tfu_1867Non-ribosomal peptide synthase:Amino acid adenylation. (3629 aa)
Tfu_18712,3-dihydroxybenzoate-AMP ligase. (543 aa)
Tfu_1998Putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase. (508 aa)
Tfu_2158Putative long-chain-fatty-acid-CoA ligase. (515 aa)
Tfu_2245acetoacetyl-CoA synthase. (654 aa)
Tfu_2248Putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase. (550 aa)
Tfu_2808Putative acetyl-coenzyme A synthetase. (581 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (656 aa)
Tfu_1031Long-chain fatty-acid-CoA ligase. (598 aa)
Tfu_1300DitJ-like CoA ligase (AMP forming), possibly related to diterpenoid metabolism. (547 aa)
Your Current Organism:
Thermobifida fusca
NCBI taxonomy Id: 269800
Other names: T. fusca YX, Thermobifida fusca YX, Thermobifida fusca str. YX, Thermobifida fusca strain YX
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