(93 nodes) Phosphorelay signal transduction system, and CheY-like superfamily network (Salegentibacter mishustinae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KRG30297.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (113 aa)
	KRG30298.1	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
	KRG30299.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	KRG30301.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
	KRG30325.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
	KRG30404.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (741 aa)
	KRG30454.1	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
	KRG30664.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (624 aa)
	KRG30755.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
	KRG30756.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (885 aa)
	KRG30759.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
	KRG30760.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (132 aa)
	KRG28925.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
	KRG28926.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
	KRG29192.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (723 aa)
	KRG29193.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (584 aa)
	KRG29194.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
	KRG29217.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
	KRG29224.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1214 aa)
	KRG29225.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (737 aa)
	KRG29226.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	KRG29227.1	Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
	KRG29228.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
	KRG29229.1	Gamma-glutamyltranspeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (571 aa)
	KRG29230.1	NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family. (200 aa)
	KRG29259.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
	KRG29260.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	KRG29376.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (639 aa)
	KRG29343.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
	KRG28250.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (641 aa)
	KRG28251.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
	KRG28255.1	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
	KRG28256.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	KRG28257.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	KRG28258.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
	KRG28268.1	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (909 aa)
	KRG28276.1	Collagen-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (722 aa)
	KRG28277.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
	KRG28278.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
	KRG28279.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
	KRG28280.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
	KRG28281.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
	KRG28282.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
	KRG28679.1	Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	KRG28283.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
	KRG28285.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
	KRG28358.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (737 aa)
	KRG28376.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
	KRG28524.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
	KRG28628.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (994 aa)
	KRG28629.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
	KRG28645.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1013 aa)
	KRG28646.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	KRG27700.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (135 aa)
	KRG27701.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1168 aa)
	KRG27702.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
	KRG27713.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (694 aa)
	KRG27779.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
	KRG27804.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (669 aa)
	KRG27805.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
	KRG27810.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
	KRG27900.1	RNA polymerase sigma-54 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
	KRG27925.1	ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
	KRG27926.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
	KRG27953.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
	KRG27954.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
	KRG27494.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	KRG27495.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (805 aa)
	KRG27501.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
	KRG27595.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	KRG27596.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
	KRG27617.1	AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
	KRG27133.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
	KRG27134.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
	KRG27152.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1447 aa)
	KRG27153.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
	KRG27212.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1277 aa)
	KRG27213.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
	KRG27214.1	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
	KRG27215.1	Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	KRG30069.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
	KRG30071.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
	KRG30072.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
	KRG30084.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (78 aa)
	KRG30085.1	Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)
	KRG30086.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
	KRG30087.1	Alkylhydroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
	KRG30088.1	FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
	KRG30117.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (441 aa)
	KRG30118.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
	KRG30256.1	LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
	KRG29835.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
	KRG29644.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)

Your Current Organism:

Salegentibacter mishustinae

NCBI taxonomy Id: 270918
Other names: DSM 23404, KCTC 12263, KMM 6049, LMG 22584, LMG:22584, NBRC 100592, S. mishustinae, Salegentibacter mishustinae Nedashkovskaya et al. 2005

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRG27133.1	KRG27134.1	APR42_11505	APR42_11510	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685
KRG27133.1	KRG27153.1	APR42_11505	APR42_11615	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
KRG27133.1	KRG27214.1	APR42_11505	APR42_11960	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.463
KRG27133.1	KRG27495.1	APR42_11505	APR42_10470	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
KRG27133.1	KRG27501.1	APR42_11505	APR42_10500	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
KRG27133.1	KRG27700.1	APR42_11505	APR42_08045	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.971
KRG27133.1	KRG27701.1	APR42_11505	APR42_08050	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593
KRG27133.1	KRG27702.1	APR42_11505	APR42_08055	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
KRG27133.1	KRG27713.1	APR42_11505	APR42_08110	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
KRG27133.1	KRG27810.1	APR42_11505	APR42_08635	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.780
KRG27133.1	KRG27925.1	APR42_11505	APR42_09260	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
KRG27133.1	KRG27926.1	APR42_11505	APR42_09265	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
KRG27133.1	KRG27953.1	APR42_11505	APR42_09405	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
KRG27133.1	KRG27954.1	APR42_11505	APR42_09410	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.605
KRG27133.1	KRG28268.1	APR42_11505	APR42_05630	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
KRG27133.1	KRG28281.1	APR42_11505	APR42_05695	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.542
KRG27133.1	KRG28282.1	APR42_11505	APR42_05700	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
KRG27133.1	KRG28358.1	APR42_11505	APR42_06100	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
KRG27133.1	KRG28926.1	APR42_11505	APR42_03070	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
KRG27133.1	KRG29192.1	APR42_11505	APR42_04470	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.427

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