5 items (Citrus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067DB45	Uncharacterized protein. (190 aa)
	A0A067EZ51	Uncharacterized protein; Belongs to the glycosyltransferase 2 family. (250 aa)
	A0A067F1G6	Uncharacterized protein. (639 aa)
	A0A067F219	Uncharacterized protein. (788 aa)
	A0A067G7X5	Uncharacterized protein. (628 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067DB45	A0A067EZ51	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.403
A0A067DB45	A0A067F1G6	Uncharacterized protein.	Uncharacterized protein.	0.470
A0A067DB45	A0A067F219	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A067DB45	A0A067G7X5	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A067EZ51	A0A067DB45	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.403
A0A067EZ51	A0A067F1G6	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.439
A0A067EZ51	A0A067F219	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.537
A0A067EZ51	A0A067G7X5	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	Uncharacterized protein.	0.442
A0A067F1G6	A0A067DB45	Uncharacterized protein.	Uncharacterized protein.	0.470
A0A067F1G6	A0A067EZ51	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.439
A0A067F1G6	A0A067F219	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A067F1G6	A0A067G7X5	Uncharacterized protein.	Uncharacterized protein.	0.430
A0A067F219	A0A067DB45	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A067F219	A0A067EZ51	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.537
A0A067F219	A0A067F1G6	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A067G7X5	A0A067DB45	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A067G7X5	A0A067EZ51	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 2 family.	0.442
A0A067G7X5	A0A067F1G6	Uncharacterized protein.	Uncharacterized protein.	0.430