43 items (Citrus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067DL94	RNA_pol_Rpb2_1 domain-containing protein. (125 aa)
	A0A067DBB4	Uncharacterized protein. (305 aa)
	A0A067H6E0	WD_REPEATS_REGION domain-containing protein. (532 aa)
	A0A067H4A8	Uncharacterized protein. (244 aa)
	A0A067H2P9	WRC domain-containing protein. (284 aa)
	A0A067GZF8	Uncharacterized protein. (328 aa)
	A0A067GXR5	Uncharacterized protein. (448 aa)
	A0A067GUT3	Rad21_Rec8_N domain-containing protein. (367 aa)
	A0A067GUM7	Uncharacterized protein. (154 aa)
	A0A067GTE5	CULLIN_2 domain-containing protein; Belongs to the cullin family. (846 aa)
	A0A067GRF5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (293 aa)
	A0A067GNG1	Uncharacterized protein. (1048 aa)
	A0A067GEA8	HMG box domain-containing protein. (232 aa)
	A0A067G9H0	Uncharacterized protein. (357 aa)
	A0A067G8I8	Uncharacterized protein. (251 aa)
	A0A067G7C9	Uncharacterized protein. (281 aa)
	A0A067G6T8	Uncharacterized protein. (338 aa)
	A0A067G6L1	zf-C3HC4 domain-containing protein. (86 aa)
	A0A067G5M4	RING-type domain-containing protein. (386 aa)
	A0A067G4F9	AAI domain-containing protein. (183 aa)
	A0A067G4D7	Uncharacterized protein. (283 aa)
	A0A067G2Q3	RNase III domain-containing protein. (184 aa)
	A0A067FMV8	AAI domain-containing protein. (242 aa)
	A0A067FBD9	Beta-Casp domain-containing protein. (423 aa)
	A0A067FBD5	Homeobox domain-containing protein. (336 aa)
	A0A067F901	Homeobox domain-containing protein. (352 aa)
	A0A067F1G9	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (229 aa)
	A0A067F0B0	Lactamase_B domain-containing protein. (202 aa)
	A0A067EV25	Uncharacterized protein. (241 aa)
	A0A067EMW2	Uncharacterized protein. (255 aa)
	A0A067ELM3	HAUS6_N domain-containing protein. (727 aa)
	A0A067EKQ0	NUC153 domain-containing protein. (702 aa)
	A0A067ECH9	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	A0A067E726	Uncharacterized protein. (177 aa)
	A0A067E6L6	Uncharacterized protein. (450 aa)
	A0A067E651	Nodulin-like domain-containing protein. (609 aa)
	A0A067E1G9	RING-type domain-containing protein. (386 aa)
	A0A067DY84	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (348 aa)
	A0A067DXK7	Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (344 aa)
	A0A067DU81	Uncharacterized protein. (361 aa)
	A0A067DSG6	CBF domain-containing protein. (1048 aa)
	A0A067DN93	Uncharacterized protein. (205 aa)
	A0A067DLM2	Uncharacterized protein. (660 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067DBB4	A0A067DL94	Uncharacterized protein.	RNA_pol_Rpb2_1 domain-containing protein.	0.613
A0A067DBB4	A0A067DLM2	Uncharacterized protein.	Uncharacterized protein.	0.613
A0A067DBB4	A0A067DU81	Uncharacterized protein.	Uncharacterized protein.	0.613
A0A067DBB4	A0A067DXK7	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.613
A0A067DBB4	A0A067DY84	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.613
A0A067DBB4	A0A067E6L6	Uncharacterized protein.	Uncharacterized protein.	0.613
A0A067DBB4	A0A067EMW2	Uncharacterized protein.	Uncharacterized protein.	0.872
A0A067DBB4	A0A067G8I8	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A067DL94	A0A067DBB4	RNA_pol_Rpb2_1 domain-containing protein.	Uncharacterized protein.	0.613
A0A067DL94	A0A067DSG6	RNA_pol_Rpb2_1 domain-containing protein.	CBF domain-containing protein.	0.735
A0A067DL94	A0A067DU81	RNA_pol_Rpb2_1 domain-containing protein.	Uncharacterized protein.	0.600
A0A067DL94	A0A067DY84	RNA_pol_Rpb2_1 domain-containing protein.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.600
A0A067DL94	A0A067E6L6	RNA_pol_Rpb2_1 domain-containing protein.	Uncharacterized protein.	0.600
A0A067DL94	A0A067EKQ0	RNA_pol_Rpb2_1 domain-containing protein.	NUC153 domain-containing protein.	0.726
A0A067DL94	A0A067G8I8	RNA_pol_Rpb2_1 domain-containing protein.	Uncharacterized protein.	0.601
A0A067DL94	A0A067H6E0	RNA_pol_Rpb2_1 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.591
A0A067DLM2	A0A067DBB4	Uncharacterized protein.	Uncharacterized protein.	0.613
A0A067DLM2	A0A067DSG6	Uncharacterized protein.	CBF domain-containing protein.	0.735
A0A067DLM2	A0A067DU81	Uncharacterized protein.	Uncharacterized protein.	0.957
A0A067DLM2	A0A067DXK7	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNA polymerase beta chain family.	0.961