13 items (Citrus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067ETG9	Uncharacterized protein. (237 aa)
	A0A067D6G6	S1 domain-containing protein. (327 aa)
	A0A067DBP7	Uncharacterized protein. (150 aa)
	A0A067DJD6	Uncharacterized protein. (274 aa)
	A0A067DMU2	F-box domain-containing protein. (412 aa)
	A0A067DQC7	Uncharacterized protein. (302 aa)
	A0A067ETV6	Uncharacterized protein. (297 aa)
	A0A067EWL7	Uncharacterized protein. (292 aa)
	A0A067F1L2	Uncharacterized protein. (465 aa)
	A0A067F896	Uncharacterized protein. (274 aa)
	A0A067FTA8	Uncharacterized protein. (280 aa)
	A0A067FVK4	Uncharacterized protein. (274 aa)
	A0A067G1Y6	S1 domain-containing protein. (238 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067D6G6	A0A067DQC7	S1 domain-containing protein.	Uncharacterized protein.	0.997
A0A067D6G6	A0A067ETG9	S1 domain-containing protein.	Uncharacterized protein.	0.998
A0A067D6G6	A0A067F1L2	S1 domain-containing protein.	Uncharacterized protein.	0.998
A0A067D6G6	A0A067G1Y6	S1 domain-containing protein.	S1 domain-containing protein.	0.998
A0A067DBP7	A0A067DJD6	Uncharacterized protein.	Uncharacterized protein.	0.560
A0A067DBP7	A0A067ETV6	Uncharacterized protein.	Uncharacterized protein.	0.591
A0A067DBP7	A0A067EWL7	Uncharacterized protein.	Uncharacterized protein.	0.543
A0A067DBP7	A0A067F896	Uncharacterized protein.	Uncharacterized protein.	0.564
A0A067DBP7	A0A067FTA8	Uncharacterized protein.	Uncharacterized protein.	0.553
A0A067DBP7	A0A067FVK4	Uncharacterized protein.	Uncharacterized protein.	0.563
A0A067DJD6	A0A067DBP7	Uncharacterized protein.	Uncharacterized protein.	0.560
A0A067DJD6	A0A067ETV6	Uncharacterized protein.	Uncharacterized protein.	0.578
A0A067DJD6	A0A067EWL7	Uncharacterized protein.	Uncharacterized protein.	0.554
A0A067DJD6	A0A067F896	Uncharacterized protein.	Uncharacterized protein.	0.545
A0A067DJD6	A0A067FTA8	Uncharacterized protein.	Uncharacterized protein.	0.556
A0A067DJD6	A0A067FVK4	Uncharacterized protein.	Uncharacterized protein.	0.545
A0A067DQC7	A0A067D6G6	Uncharacterized protein.	S1 domain-containing protein.	0.997
A0A067DQC7	A0A067ETG9	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A067DQC7	A0A067F1L2	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A067DQC7	A0A067G1Y6	Uncharacterized protein.	S1 domain-containing protein.	0.998