14 items (Citrus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067DRK9	Uncharacterized protein. (560 aa)
	A0A067DEI0	Uncharacterized protein. (197 aa)
	A0A067DLN7	C2 domain-containing protein. (2100 aa)
	A0A067DM80	Uncharacterized protein. (485 aa)
	A0A067DE12	Uncharacterized protein. (208 aa)
	A0A067E301	Uncharacterized protein. (180 aa)
	A0A067ECL9	Uncharacterized protein. (439 aa)
	A0A067F3V3	PAS domain-containing protein. (625 aa)
	A0A067FTV8	Uncharacterized protein. (176 aa)
	A0A067FTZ8	Uncharacterized protein. (205 aa)
	A0A067GKM0	Uncharacterized protein. (452 aa)
	A0A067GKM5	Uncharacterized protein. (802 aa)
	A0A067GZ08	C2 domain-containing protein. (2138 aa)
	A0A067CYY7	Uncharacterized protein. (176 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067CYY7	A0A067DE12	Uncharacterized protein.	Uncharacterized protein.	0.466
A0A067CYY7	A0A067FTZ8	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A067DE12	A0A067CYY7	Uncharacterized protein.	Uncharacterized protein.	0.466
A0A067DE12	A0A067FTV8	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A067DEI0	A0A067DRK9	Uncharacterized protein.	Uncharacterized protein.	0.918
A0A067DRK9	A0A067DEI0	Uncharacterized protein.	Uncharacterized protein.	0.918
A0A067FTV8	A0A067DE12	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A067FTV8	A0A067FTZ8	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A067FTZ8	A0A067CYY7	Uncharacterized protein.	Uncharacterized protein.	0.467
A0A067FTZ8	A0A067FTV8	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A067GKM0	A0A067GKM5	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A067GKM5	A0A067GKM0	Uncharacterized protein.	Uncharacterized protein.	0.964