(50 nodes) SCF ubiquitin ligase complex network (Citrus sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067H2K4	Uncharacterized protein; Belongs to the SKP1 family. (421 aa)
	A0A067FX48	Uncharacterized protein; Belongs to the SKP1 family. (160 aa)
	A0A067FYW0	Uncharacterized protein; Belongs to the SKP1 family. (168 aa)
	A0A067FZV7	F-box domain-containing protein. (547 aa)
	A0A067G2N7	RING-type domain-containing protein. (118 aa)
	A0A067G359	Uncharacterized protein. (402 aa)
	A0A067G4X5	F-box domain-containing protein. (336 aa)
	A0A067G7W0	Uncharacterized protein. (585 aa)
	A0A067GFM2	F-box domain-containing protein. (282 aa)
	A0A067GK94	Uncharacterized protein. (579 aa)
	A0A067GQX7	Uncharacterized protein. (198 aa)
	A0A067GZA5	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (101 aa)
	A0A067GZZ2	F-box domain-containing protein. (464 aa)
	A0A067F5Z4	Uncharacterized protein; Belongs to the SKP1 family. (174 aa)
	A0A067FCB2	Uncharacterized protein. (331 aa)
	A0A067FD03	Uncharacterized protein. (336 aa)
	A0A067FEA6	Uncharacterized protein; Belongs to the SKP1 family. (176 aa)
	A0A067FJC2	Uncharacterized protein. (664 aa)
	A0A067FK41	Uncharacterized protein; Belongs to the SKP1 family. (128 aa)
	A0A067FL58	Uncharacterized protein; Belongs to the SKP1 family. (158 aa)
	A0A067FN07	Uncharacterized protein. (369 aa)
	A0A067FNR9	Uncharacterized protein. (237 aa)
	A0A067FNS0	Uncharacterized protein; Belongs to the SKP1 family. (164 aa)
	A0A067H0J9	Uncharacterized protein. (413 aa)
	A0A067H7J3	F-box domain-containing protein. (374 aa)
	A0A067HHE3	F-box domain-containing protein. (585 aa)
	A0A067CZT7	Uncharacterized protein. (77 aa)
	A0A067D2Z3	Uncharacterized protein; Belongs to the SKP1 family. (161 aa)
	A0A067D731	Uncharacterized protein. (150 aa)
	A0A067D866	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (72 aa)
	A0A067D981	SMI1_KNR4 domain-containing protein. (208 aa)
	A0A067DBI8	Uncharacterized protein; Belongs to the SKP1 family. (121 aa)
	A0A067DDD6	ApaG domain-containing protein. (99 aa)
	A0A067DHD4	Uncharacterized protein. (224 aa)
	A0A067DHG8	Uncharacterized protein. (650 aa)
	A0A067DNR4	F-box domain-containing protein. (557 aa)
	A0A067DQL4	F-box domain-containing protein. (545 aa)
	A0A067DV06	ApaG domain-containing protein. (361 aa)
	A0A067DVV8	Uncharacterized protein. (75 aa)
	A0A067E8Y4	F-box domain-containing protein. (570 aa)
	A0A067EDL3	Skp1 domain-containing protein; Belongs to the SKP1 family. (357 aa)
	A0A067EEG7	Uncharacterized protein. (529 aa)
	A0A067EJC5	Uncharacterized protein. (390 aa)
	A0A067EKB4	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (71 aa)
	A0A067ESY4	F-box domain-containing protein. (278 aa)
	A0A067EWM2	Uncharacterized protein. (312 aa)
	A0A067F167	Uncharacterized protein. (341 aa)
	A0A067F479	Uncharacterized protein. (350 aa)
	A0A067F492	F-box domain-containing protein. (195 aa)
	A0A067F525	Uncharacterized protein. (307 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067CZT7	A0A067DNR4	Uncharacterized protein.	F-box domain-containing protein.	0.402
A0A067CZT7	A0A067G2N7	Uncharacterized protein.	RING-type domain-containing protein.	0.540
A0A067D2Z3	A0A067FZV7	Uncharacterized protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.732
A0A067D2Z3	A0A067G2N7	Uncharacterized protein; Belongs to the SKP1 family.	RING-type domain-containing protein.	0.847
A0A067D866	A0A067EKB4	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.514
A0A067D866	A0A067FZV7	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.732
A0A067D866	A0A067G2N7	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	RING-type domain-containing protein.	0.870
A0A067DBI8	A0A067FZV7	Uncharacterized protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.732
A0A067DBI8	A0A067G2N7	Uncharacterized protein; Belongs to the SKP1 family.	RING-type domain-containing protein.	0.835
A0A067DHG8	A0A067G2N7	Uncharacterized protein.	RING-type domain-containing protein.	0.540
A0A067DNR4	A0A067CZT7	F-box domain-containing protein.	Uncharacterized protein.	0.402
A0A067DVV8	A0A067G2N7	Uncharacterized protein.	RING-type domain-containing protein.	0.540
A0A067E8Y4	A0A067G2N7	F-box domain-containing protein.	RING-type domain-containing protein.	0.590
A0A067EDL3	A0A067FZV7	Skp1 domain-containing protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.732
A0A067EDL3	A0A067G2N7	Skp1 domain-containing protein; Belongs to the SKP1 family.	RING-type domain-containing protein.	0.833
A0A067EEG7	A0A067G2N7	Uncharacterized protein.	RING-type domain-containing protein.	0.540
A0A067EJC5	A0A067G2N7	Uncharacterized protein.	RING-type domain-containing protein.	0.540
A0A067EKB4	A0A067D866	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.514
A0A067EKB4	A0A067FZV7	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	F-box domain-containing protein.	0.732
A0A067EKB4	A0A067G2N7	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	RING-type domain-containing protein.	0.847