(9 nodes) COI1, F-box network (Citrus sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067DFS5	F-box_5 domain-containing protein. (467 aa)
	A0A067E8Y4	F-box domain-containing protein. (570 aa)
	A0A067G0U1	Uncharacterized protein. (597 aa)
	A0A067G7W0	Uncharacterized protein. (585 aa)
	A0A067GGT1	F-box_5 domain-containing protein. (714 aa)
	A0A067GHT6	F-box domain-containing protein. (608 aa)
	A0A067GK94	Uncharacterized protein. (579 aa)
	A0A067H0J9	Uncharacterized protein. (413 aa)
	A0A067HHE3	F-box domain-containing protein. (585 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067G7W0	A0A067GK94	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A067G7W0	A0A067HHE3	Uncharacterized protein.	F-box domain-containing protein.	0.901
A0A067GGT1	A0A067HHE3	F-box_5 domain-containing protein.	F-box domain-containing protein.	0.480
A0A067GK94	A0A067G7W0	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A067GK94	A0A067HHE3	Uncharacterized protein.	F-box domain-containing protein.	0.901
A0A067HHE3	A0A067G7W0	F-box domain-containing protein.	Uncharacterized protein.	0.901
A0A067HHE3	A0A067GGT1	F-box domain-containing protein.	F-box_5 domain-containing protein.	0.480
A0A067HHE3	A0A067GK94	F-box domain-containing protein.	Uncharacterized protein.	0.901