44 items (Citrus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067EH85	Uncharacterized protein. (561 aa)
	A0A067EHS2	Uncharacterized protein. (538 aa)
	A0A067EJ05	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (578 aa)
	A0A067EMA2	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (578 aa)
	A0A067EPW7	Uncharacterized protein. (506 aa)
	A0A067ES60	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (568 aa)
	A0A067EVQ5	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (566 aa)
	A0A067HBD5	Uncharacterized protein. (542 aa)
	A0A067GS84	Uncharacterized protein. (543 aa)
	A0A067GKZ7	Uncharacterized protein. (472 aa)
	A0A067GBZ6	Plastocyanin-like domain-containing protein. (162 aa)
	A0A067GBZ0	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (577 aa)
	A0A067GBE1	Uncharacterized protein; Belongs to the multicopper oxidase family. (392 aa)
	A0A067G3P8	Plastocyanin-like domain-containing protein. (282 aa)
	A0A067G0F5	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (580 aa)
	A0A067G0A6	Plastocyanin-like domain-containing protein. (162 aa)
	A0A067G077	Uncharacterized protein. (285 aa)
	A0A067FUZ7	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (450 aa)
	A0A067FUC0	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (564 aa)
	A0A067FQ46	Uncharacterized protein. (545 aa)
	A0A067FNZ7	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (553 aa)
	A0A067H3D4	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (571 aa)
	A0A067GVV1	Uncharacterized protein; Belongs to the multicopper oxidase family. (412 aa)
	A0A067GVK4	Uncharacterized protein. (541 aa)
	A0A067D302	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (524 aa)
	A0A067D3I2	Uncharacterized protein; Belongs to the multicopper oxidase family. (226 aa)
	A0A067DDR4	Uncharacterized protein; Belongs to the multicopper oxidase family. (487 aa)
	A0A067DVY1	Uncharacterized protein; Belongs to the multicopper oxidase family. (586 aa)
	A0A067DX60	Uncharacterized protein. (504 aa)
	A0A067DZV7	Uncharacterized protein. (591 aa)
	A0A067E0J7	Uncharacterized protein; Belongs to the multicopper oxidase family. (384 aa)
	A0A067E148	Uncharacterized protein. (521 aa)
	A0A067E1S5	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (579 aa)
	A0A067E4F2	Plastocyanin-like domain-containing protein. (175 aa)
	A0A067EA18	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (562 aa)
	A0A067FNI2	Uncharacterized protein. (579 aa)
	A0A067FJR6	Uncharacterized protein; Belongs to the multicopper oxidase family. (580 aa)
	A0A067FI70	Plastocyanin-like domain-containing protein. (110 aa)
	A0A067FDG1	Uncharacterized protein. (595 aa)
	A0A067EXE4	Uncharacterized protein. (595 aa)
	A0A067EVR0	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (569 aa)
	A0A067EBE7	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (578 aa)
	A0A067EC96	Uncharacterized protein. (446 aa)
	A0A067ED47	Plastocyanin-like domain-containing protein. (105 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067DX60	A0A067GBZ6	Uncharacterized protein.	Plastocyanin-like domain-containing protein.	0.452
A0A067E0J7	A0A067E4F2	Uncharacterized protein; Belongs to the multicopper oxidase family.	Plastocyanin-like domain-containing protein.	0.436
A0A067E0J7	A0A067GBZ6	Uncharacterized protein; Belongs to the multicopper oxidase family.	Plastocyanin-like domain-containing protein.	0.462
A0A067E148	A0A067GBZ6	Uncharacterized protein.	Plastocyanin-like domain-containing protein.	0.410
A0A067E4F2	A0A067E0J7	Plastocyanin-like domain-containing protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.436
A0A067E4F2	A0A067GBE1	Plastocyanin-like domain-containing protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.418
A0A067E4F2	A0A067GVV1	Plastocyanin-like domain-containing protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.500
A0A067EC96	A0A067ED47	Uncharacterized protein.	Plastocyanin-like domain-containing protein.	0.459
A0A067ED47	A0A067EC96	Plastocyanin-like domain-containing protein.	Uncharacterized protein.	0.459
A0A067EH85	A0A067FJR6	Uncharacterized protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.914
A0A067EH85	A0A067GBZ6	Uncharacterized protein.	Plastocyanin-like domain-containing protein.	0.500
A0A067FJR6	A0A067EH85	Uncharacterized protein; Belongs to the multicopper oxidase family.	Uncharacterized protein.	0.914
A0A067GBE1	A0A067E4F2	Uncharacterized protein; Belongs to the multicopper oxidase family.	Plastocyanin-like domain-containing protein.	0.418
A0A067GBE1	A0A067GBZ6	Uncharacterized protein; Belongs to the multicopper oxidase family.	Plastocyanin-like domain-containing protein.	0.449
A0A067GBZ6	A0A067DX60	Plastocyanin-like domain-containing protein.	Uncharacterized protein.	0.452
A0A067GBZ6	A0A067E0J7	Plastocyanin-like domain-containing protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.462
A0A067GBZ6	A0A067E148	Plastocyanin-like domain-containing protein.	Uncharacterized protein.	0.410
A0A067GBZ6	A0A067EH85	Plastocyanin-like domain-containing protein.	Uncharacterized protein.	0.500
A0A067GBZ6	A0A067GBE1	Plastocyanin-like domain-containing protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.449
A0A067GBZ6	A0A067GVV1	Plastocyanin-like domain-containing protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.500