(18 nodes) (2015) Cell Wall Metabolism in Response to Abiotic Stress. network (Citrus sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067FKR0	NAD(P)-bd_dom domain-containing protein. (424 aa)
	A0A067FGM9	Epimerase domain-containing protein. (421 aa)
	A0A067F8F3	Xylose isomerase. (487 aa)
	A0A067F0I8	Annexin. (321 aa)
	A0A067ERS2	Annexin. (316 aa)
	A0A067EHM7	Phenylalanine ammonia-lyase. (555 aa)
	A0A067E6M3	Phenylalanine ammonia-lyase. (718 aa)
	A0A067E5T0	Phenylalanine ammonia-lyase. (722 aa)
	A0A067DU11	NAD(P)-bd_dom domain-containing protein. (476 aa)
	A0A067DDZ2	Epimerase domain-containing protein. (178 aa)
	A0A067GP37	Uncharacterized protein. (651 aa)
	A0A067DDX3	Annexin. (62 aa)
	A0A067HDB8	Epimerase domain-containing protein. (439 aa)
	A0A067H6A5	Annexin. (113 aa)
	A0A067GX16	Annexin. (350 aa)
	A0A067GQH6	Annexin. (316 aa)
	A0A067D5D3	Uncharacterized protein; Belongs to the PAL/histidase family. (396 aa)
	A0A067FPM6	NAD(P)-bd_dom domain-containing protein. (413 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067D5D3	A0A067DDZ2	Uncharacterized protein; Belongs to the PAL/histidase family.	Epimerase domain-containing protein.	0.662
A0A067D5D3	A0A067E5T0	Uncharacterized protein; Belongs to the PAL/histidase family.	Phenylalanine ammonia-lyase.	0.900
A0A067D5D3	A0A067E6M3	Uncharacterized protein; Belongs to the PAL/histidase family.	Phenylalanine ammonia-lyase.	0.900
A0A067DDZ2	A0A067D5D3	Epimerase domain-containing protein.	Uncharacterized protein; Belongs to the PAL/histidase family.	0.662
A0A067DDZ2	A0A067E5T0	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.662
A0A067DDZ2	A0A067E6M3	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.662
A0A067DDZ2	A0A067EHM7	Epimerase domain-containing protein.	Phenylalanine ammonia-lyase.	0.662
A0A067DU11	A0A067GP37	NAD(P)-bd_dom domain-containing protein.	Uncharacterized protein.	0.957
A0A067E5T0	A0A067D5D3	Phenylalanine ammonia-lyase.	Uncharacterized protein; Belongs to the PAL/histidase family.	0.900
A0A067E5T0	A0A067DDZ2	Phenylalanine ammonia-lyase.	Epimerase domain-containing protein.	0.662
A0A067E5T0	A0A067E6M3	Phenylalanine ammonia-lyase.	Phenylalanine ammonia-lyase.	0.900
A0A067E6M3	A0A067D5D3	Phenylalanine ammonia-lyase.	Uncharacterized protein; Belongs to the PAL/histidase family.	0.900
A0A067E6M3	A0A067DDZ2	Phenylalanine ammonia-lyase.	Epimerase domain-containing protein.	0.662
A0A067E6M3	A0A067E5T0	Phenylalanine ammonia-lyase.	Phenylalanine ammonia-lyase.	0.900
A0A067EHM7	A0A067DDZ2	Phenylalanine ammonia-lyase.	Epimerase domain-containing protein.	0.662
A0A067ERS2	A0A067GP37	Annexin.	Uncharacterized protein.	0.403
A0A067FGM9	A0A067GP37	Epimerase domain-containing protein.	Uncharacterized protein.	0.954
A0A067FKR0	A0A067GP37	NAD(P)-bd_dom domain-containing protein.	Uncharacterized protein.	0.943
A0A067FPM6	A0A067GP37	NAD(P)-bd_dom domain-containing protein.	Uncharacterized protein.	0.943
A0A067GP37	A0A067DU11	Uncharacterized protein.	NAD(P)-bd_dom domain-containing protein.	0.957