19 items (Citrus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067GYS4	Uncharacterized protein. (514 aa)
	A0A067D6G6	S1 domain-containing protein. (327 aa)
	A0A067DWQ2	S1 motif domain-containing protein. (194 aa)
	A0A067DX79	SHS2_Rpb7-N domain-containing protein. (182 aa)
	A0A067DXW7	S1 motif domain-containing protein. (195 aa)
	A0A067EBA0	Uncharacterized protein. (210 aa)
	A0A067EWB2	S1 motif domain-containing protein. (974 aa)
	A0A067F1N7	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1344 aa)
	A0A067FGH8	Uncharacterized protein. (681 aa)
	A0A067FS71	S1 motif domain-containing protein. (916 aa)
	A0A067FXJ1	Uncharacterized protein. (414 aa)
	A0A067FY88	Uncharacterized protein. (1045 aa)
	A0A067G089	S1 motif domain-containing protein. (259 aa)
	A0A067G1G6	S1 motif domain-containing protein. (681 aa)
	A0A067G1Y6	S1 domain-containing protein. (238 aa)
	A0A067G5D7	Uncharacterized protein. (572 aa)
	A0A067G5W7	Uncharacterized protein. (1152 aa)
	A0A067GCL7	S1-like domain-containing protein. (140 aa)
	A0A067H1L9	Uncharacterized protein. (148 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067D6G6	A0A067DWQ2	S1 domain-containing protein.	S1 motif domain-containing protein.	0.818
A0A067D6G6	A0A067DXW7	S1 domain-containing protein.	S1 motif domain-containing protein.	0.818
A0A067D6G6	A0A067EBA0	S1 domain-containing protein.	Uncharacterized protein.	0.997
A0A067D6G6	A0A067EWB2	S1 domain-containing protein.	S1 motif domain-containing protein.	0.418
A0A067D6G6	A0A067FS71	S1 domain-containing protein.	S1 motif domain-containing protein.	0.418
A0A067D6G6	A0A067FXJ1	S1 domain-containing protein.	Uncharacterized protein.	0.818
A0A067D6G6	A0A067FY88	S1 domain-containing protein.	Uncharacterized protein.	0.480
A0A067D6G6	A0A067G1Y6	S1 domain-containing protein.	S1 domain-containing protein.	0.998
A0A067D6G6	A0A067G5D7	S1 domain-containing protein.	Uncharacterized protein.	0.891
A0A067D6G6	A0A067G5W7	S1 domain-containing protein.	Uncharacterized protein.	0.891
A0A067D6G6	A0A067GYS4	S1 domain-containing protein.	Uncharacterized protein.	0.818
A0A067DWQ2	A0A067D6G6	S1 motif domain-containing protein.	S1 domain-containing protein.	0.818
A0A067DWQ2	A0A067DXW7	S1 motif domain-containing protein.	S1 motif domain-containing protein.	0.502
A0A067DWQ2	A0A067EBA0	S1 motif domain-containing protein.	Uncharacterized protein.	0.810
A0A067DWQ2	A0A067FGH8	S1 motif domain-containing protein.	Uncharacterized protein.	0.788
A0A067DWQ2	A0A067FY88	S1 motif domain-containing protein.	Uncharacterized protein.	0.418
A0A067DWQ2	A0A067G1Y6	S1 motif domain-containing protein.	S1 domain-containing protein.	0.766
A0A067DX79	A0A067F1N7	SHS2_Rpb7-N domain-containing protein.	Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.	0.803
A0A067DXW7	A0A067D6G6	S1 motif domain-containing protein.	S1 domain-containing protein.	0.818
A0A067DXW7	A0A067DWQ2	S1 motif domain-containing protein.	S1 motif domain-containing protein.	0.502