(42 nodes) Phenylalanine, tyrosine and tryptophan biosynthesis network (Citrus sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067D4U0	Aminotran_1_2 domain-containing protein. (422 aa)
	A0A067DAW0	PALP domain-containing protein. (469 aa)
	A0A067DI40	Prephenate dehydratase domain-containing protein. (241 aa)
	A0A067DJA2	Aminotran_1_2 domain-containing protein. (387 aa)
	A0A067DLZ9	Chorismate synthase. (446 aa)
	A0A067DND1	Aminotran_1_2 domain-containing protein. (419 aa)
	A0A067DPD6	Prephenate/arogenate dehydrogenase domain-containing protein. (275 aa)
	A0A067DTM3	Uncharacterized protein. (519 aa)
	A0A067DVJ1	Aminotran_1_2 domain-containing protein. (471 aa)
	A0A067DVM4	Aminotran_1_2 domain-containing protein. (421 aa)
	A0A067E0L6	Prephenate/arogenate dehydrogenase domain-containing protein. (335 aa)
	A0A067E2G5	Aminotran_1_2 domain-containing protein. (415 aa)
	A0A067E2K4	Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. (423 aa)
	A0A067E4R5	Aspartate aminotransferase. (407 aa)
	A0A067E4Z1	Tryptophan synthase. (465 aa)
	A0A067E5A1	Phospho-2-dehydro-3-deoxyheptonate aldolase. (422 aa)
	A0A067E6X4	IGPS domain-containing protein. (407 aa)
	A0A067E708	Aspartate aminotransferase. (435 aa)
	A0A067E7B4	Aspartate aminotransferase. (467 aa)
	A0A067EU19	Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. (339 aa)
	A0A067F0H6	Glutamine amidotransferase type-1 domain-containing protein. (229 aa)
	A0A067F9P0	Uncharacterized protein. (257 aa)
	A0A067FBA9	Phospho-2-dehydro-3-deoxyheptonate aldolase. (531 aa)
	A0A067FIX8	Aspartate aminotransferase. (337 aa)
	A0A067FJA2	Chorismate mutase. (253 aa)
	A0A067FL45	Chorismate_bind domain-containing protein. (331 aa)
	A0A067FNP1	Chorismate_bind domain-containing protein. (308 aa)
	A0A067FZB6	Uncharacterized protein; Belongs to the TrpA family. (311 aa)
	A0A067FZB8	Uncharacterized protein. (140 aa)
	A0A067G0H0	Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. (282 aa)
	A0A067G276	Glycos_transf_3 domain-containing protein. (287 aa)
	A0A067G6X1	DHQ_synthase domain-containing protein. (446 aa)
	A0A067G8P9	Uncharacterized protein. (609 aa)
	A0A067GEX6	Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine. (406 aa)
	A0A067GJE3	Aspartate aminotransferase. (309 aa)
	A0A067GJM3	Tryptophan synthase. (462 aa)
	A0A067GM49	Aspartate aminotransferase. (280 aa)
	A0A067GMZ6	Phospho-2-dehydro-3-deoxyheptonate aldolase. (263 aa)
	A0A067GWD0	Aminotran_1_2 domain-containing protein. (423 aa)
	A0A067H5W7	Uncharacterized protein. (449 aa)
	A0A067H810	Uncharacterized protein. (287 aa)
	A0A067HD33	3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. (519 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067D4U0	A0A067DI40	Aminotran_1_2 domain-containing protein.	Prephenate dehydratase domain-containing protein.	0.848
A0A067D4U0	A0A067DJA2	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.605
A0A067D4U0	A0A067DLZ9	Aminotran_1_2 domain-containing protein.	Chorismate synthase.	0.843
A0A067D4U0	A0A067DND1	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.605
A0A067D4U0	A0A067DPD6	Aminotran_1_2 domain-containing protein.	Prephenate/arogenate dehydrogenase domain-containing protein.	0.945
A0A067D4U0	A0A067DVJ1	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.630
A0A067D4U0	A0A067DVM4	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.604
A0A067D4U0	A0A067E0L6	Aminotran_1_2 domain-containing protein.	Prephenate/arogenate dehydrogenase domain-containing protein.	0.945
A0A067D4U0	A0A067E2G5	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.607
A0A067D4U0	A0A067E2K4	Aminotran_1_2 domain-containing protein.	Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.	0.897
A0A067D4U0	A0A067E4R5	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.831
A0A067D4U0	A0A067E708	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.831
A0A067D4U0	A0A067E7B4	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.831
A0A067D4U0	A0A067EU19	Aminotran_1_2 domain-containing protein.	Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.	0.897
A0A067D4U0	A0A067F0H6	Aminotran_1_2 domain-containing protein.	Glutamine amidotransferase type-1 domain-containing protein.	0.828
A0A067D4U0	A0A067FIX8	Aminotran_1_2 domain-containing protein.	Aspartate aminotransferase.	0.831
A0A067D4U0	A0A067FJA2	Aminotran_1_2 domain-containing protein.	Chorismate mutase.	0.881
A0A067D4U0	A0A067FL45	Aminotran_1_2 domain-containing protein.	Chorismate_bind domain-containing protein.	0.816
A0A067D4U0	A0A067FNP1	Aminotran_1_2 domain-containing protein.	Chorismate_bind domain-containing protein.	0.816
A0A067D4U0	A0A067FZB8	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.881