(51 nodes) Glyoxylate and dicarboxylate metabolism network (Citrus sinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A067CZI1	AMP-binding domain-containing protein. (430 aa)
	A0A067DKJ3	SHMT domain-containing protein. (245 aa)
	A0A067DKZ5	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (162 aa)
	A0A067DNB5	Glutamine amidotransferase type-2 domain-containing protein. (1155 aa)
	A0A067DQ18	Aminotran_5 domain-containing protein. (401 aa)
	A0A067DQM3	Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family. (196 aa)
	A0A067DSR4	Citrate synthase; Belongs to the citrate synthase family. (471 aa)
	A0A067DVM9	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (529 aa)
	A0A067DZT7	Malate dehydrogenase. (358 aa)
	A0A067E6Y0	Glutamine synthetase. (356 aa)
	A0A067EAX1	Uncharacterized protein. (291 aa)
	A0A067EC67	Glutamine synthetase. (356 aa)
	A0A067EGZ9	FMN hydroxy acid dehydrogenase domain-containing protein. (370 aa)
	A0A067EIA2	Thiolase_N domain-containing protein. (262 aa)
	A0A067EMZ1	Uncharacterized protein. (103 aa)
	A0A067ENV0	Uncharacterized protein. (412 aa)
	A0A067EP73	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (313 aa)
	A0A067EQX8	Malate dehydrogenase. (332 aa)
	A0A067ETX2	Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (996 aa)
	A0A067EXL9	Isocitrate lyase. (575 aa)
	A0A067EXV6	Uncharacterized protein. (523 aa)
	A0A067F228	ACT domain-containing protein. (355 aa)
	A0A067F531	Citrate synthase. (513 aa)
	A0A067F8J2	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (286 aa)
	A0A067FD72	NAD_binding_2 domain-containing protein. (290 aa)
	A0A067FHT6	Uncharacterized protein. (1002 aa)
	A0A067FJS9	Uncharacterized protein. (635 aa)
	A0A067FKN8	Malate dehydrogenase. (390 aa)
	A0A067FS22	2-Hacid_dh_C domain-containing protein. (240 aa)
	A0A067FWT5	Uncharacterized protein. (569 aa)
	A0A067FXK6	Dihydrolipoyl dehydrogenase. (507 aa)
	A0A067FXZ6	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (398 aa)
	A0A067G0F8	Uncharacterized protein. (507 aa)
	A0A067G720	Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (900 aa)
	A0A067G8D3	Glutamine synthetase. (442 aa)
	A0A067G8Y5	Uncharacterized protein. (567 aa)
	A0A067GEU9	FMN hydroxy acid dehydrogenase domain-containing protein. (402 aa)
	A0A067GFA3	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (409 aa)
	A0A067GJ60	Phosphoglycolate phosphatase. (304 aa)
	A0A067GPV7	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (128 aa)
	A0A067GQ82	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (403 aa)
	A0A067GRH7	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (519 aa)
	A0A067GT25	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (414 aa)
	A0A067GTM8	Malate dehydrogenase. (358 aa)
	A0A067GTR7	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (359 aa)
	A0A067GUG3	Uncharacterized protein. (224 aa)
	A0A067GXA5	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1058 aa)
	A0A067H2F2	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family. (598 aa)
	A0A067H4Q9	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (330 aa)
	A0A067HBI5	Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. (492 aa)
	A0A067HCV5	Malate dehydrogenase. (366 aa)

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067CZI1	A0A067DSR4	AMP-binding domain-containing protein.	Citrate synthase; Belongs to the citrate synthase family.	0.944
A0A067CZI1	A0A067EIA2	AMP-binding domain-containing protein.	Thiolase_N domain-containing protein.	0.929
A0A067CZI1	A0A067EMZ1	AMP-binding domain-containing protein.	Uncharacterized protein.	0.927
A0A067CZI1	A0A067F531	AMP-binding domain-containing protein.	Citrate synthase.	0.944
A0A067CZI1	A0A067FJS9	AMP-binding domain-containing protein.	Uncharacterized protein.	0.937
A0A067CZI1	A0A067FWT5	AMP-binding domain-containing protein.	Uncharacterized protein.	0.901
A0A067CZI1	A0A067G8Y5	AMP-binding domain-containing protein.	Uncharacterized protein.	0.901
A0A067CZI1	A0A067GT25	AMP-binding domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.929
A0A067DKJ3	A0A067DKZ5	SHMT domain-containing protein.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.881
A0A067DKJ3	A0A067DQ18	SHMT domain-containing protein.	Aminotran_5 domain-containing protein.	0.970
A0A067DKJ3	A0A067DVM9	SHMT domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.614
A0A067DKJ3	A0A067F228	SHMT domain-containing protein.	ACT domain-containing protein.	0.974
A0A067DKJ3	A0A067F531	SHMT domain-containing protein.	Citrate synthase.	0.505
A0A067DKJ3	A0A067FXK6	SHMT domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.830
A0A067DKJ3	A0A067G0F8	SHMT domain-containing protein.	Uncharacterized protein.	0.830
A0A067DKJ3	A0A067G8D3	SHMT domain-containing protein.	Glutamine synthetase.	0.450
A0A067DKJ3	A0A067GFA3	SHMT domain-containing protein.	Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.	0.980
A0A067DKJ3	A0A067GJ60	SHMT domain-containing protein.	Phosphoglycolate phosphatase.	0.461
A0A067DKJ3	A0A067GPV7	SHMT domain-containing protein.	Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.	0.881
A0A067DKJ3	A0A067GQ82	SHMT domain-containing protein.	Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.	0.693