STRINGSTRING
psbF psbF AFZ58739.1 AFZ58739.1 psbI psbI psbJ psbJ AFZ56386.1 AFZ56386.1 psb28 psb28 thf1 thf1 psbK psbK AFZ60148.1 AFZ60148.1 psbZ psbZ AFZ59964.1 AFZ59964.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psbFCytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. (45 aa)
AFZ58739.1PFAM: S4 domain; TIGRFAM: photosystem II S4 domain protein; COGs: COG2302 conserved hypothetical protein contains S4-like domain; InterPro IPR002942:IPR017506; KEGG: naz:Aazo_5081 photosystem II S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: Photosystem II S4 domain protein; TIGRFAM: Photosystem II S4. (259 aa)
psbIPhotosystem II reaction center protein I; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (38 aa)
psbJPhotosystem II reaction center protein J; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (39 aa)
AFZ56386.1PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: naz:Aazo_3192 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative uncharacterized protein. (243 aa)
psb28PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; HAMAP: Photosystem II Psb28, class 1; InterPro IPR005610; KEGG: naz:Aazo_0705 photosystem II reaction center protein Psb28; PFAM: Photosystem II Psb28, class 1; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: Photosystem II Psb28, class 1; manually curated; Belongs to the Psb28 family. (111 aa)
thf1Protein thf1; May be involved in photosynthetic membrane biogenesis. (235 aa)
psbKPhotosystem II reaction center protein K; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. (45 aa)
AFZ60148.1PFAM: PemK-like protein; KEGG: npu:Npun_R3511 hypothetical protein; SPTR: Putative uncharacterized protein. (109 aa)
psbZPhotosystem II reaction center protein Z; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family. (62 aa)
AFZ59964.1TIGRFAM: photosystem II protein PsbQ; InterPro IPR017487; KEGG: naz:Aazo_1460 photosystem II protein PsbQ; SPTR: Photosystem II protein PsbQ; TIGRFAM: Photosystem II PsbQ, cyanobacteria. (151 aa)
Your Current Organism:
Anabaena cylindrica
NCBI taxonomy Id: 272123
Other names: A. cylindrica PCC 7122, Anabaena cylindrica IAM M-1, Anabaena cylindrica NIES-19, Anabaena cylindrica PCC 7122, Anabaena cylindrica UTEX B 629, Anabaena sp. ATCC 27899, Anabaena sp. PCC 7122
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.