STRINGSTRING
APE_0759.1 APE_0759.1 ubiA ubiA APE_1622.1 APE_1622.1 APE_1952.1 APE_1952.1 APE_2421 APE_2421 APE_0201.1 APE_0201.1 APE_0159 APE_0159
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APE_0759.1Conserved hypothetical protein. (356 aa)
ubiA4-hydroxybenzoate octaprenyltransferase. (284 aa)
APE_1622.1Conserved hypothetical protein. (389 aa)
APE_1952.1Conserved hypothetical protein. (463 aa)
APE_2421FixC protein. (436 aa)
APE_0201.1Conserved hypothetical protein. (368 aa)
APE_0159Probable (S)-2,3-Di-O-farnesylgeranylglyceryl synthase. (282 aa)
Your Current Organism:
Aeropyrum pernix
NCBI taxonomy Id: 272557
Other names: A. pernix K1, Aeropyrum pernix K1, Aeropyrum pernix str. K1, Aeropyrum pernix strain K1
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