Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE_0689.1 | APE_1472 | APE_0689.1 | APE_1472 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | 2-oxoacid:ferredoxin oxidoreductase beta subunit; Catalyzes the coenzyme A-dependent oxidative decarboxylation of different 2-oxoacids such as pyruvate, 2-oxobutyrate, glyoxylate and 2-oxoglutarate to form their CoA derivatives. | 0.923 |
| APE_0689.1 | APE_1473.1 | APE_0689.1 | APE_1473.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | 2-oxoacid:ferredoxin oxidoreductase alpha subunit; Catalyzes the coenzyme A-dependent oxidative decarboxylation of different 2-oxoacids such as pyruvate, 2-oxobutyrate, glyoxylate and 2-oxoglutarate to form their CoA derivatives. | 0.927 |
| APE_0689.1 | APE_1484.1 | APE_0689.1 | APE_1484.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | 0.454 |
| APE_0689.1 | APE_2126.1 | APE_0689.1 | APE_2126.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | 2-oxoacid:ferredoxin oxidoreductase alpha subunit; Catalyzes the coenzyme A-dependent oxidative decarboxylation of different 2-oxoacids such as pyruvate, 2-oxobutyrate and glyoxylate to form their CoA derivatives. | 0.927 |
| APE_0689.1 | APE_2128 | APE_0689.1 | APE_2128 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | 2-oxoacid:ferredoxin oxidoreductase beta subunit; Catalyzes the coenzyme A-dependent oxidative decarboxylation of different 2-oxoacids such as pyruvate, 2-oxobutyrate and glyoxylate to form their CoA derivatives. | 0.923 |
| APE_0689.1 | acsA | APE_0689.1 | APE_1346.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Acetyl-coenzyme A synthetase. | 0.426 |
| APE_0689.1 | acsA-2 | APE_0689.1 | APE_2604 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Acetyl-coenzyme A synthetase. | 0.426 |
| APE_0689.1 | acsA-3 | APE_0689.1 | APE_2604a.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Acetyl-coenzyme A synthetase. | 0.426 |
| APE_0689.1 | citB | APE_0689.1 | APE_1618.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Aconitate hydratase; Aconitase. | 0.996 |
| APE_0689.1 | fumC | APE_0689.1 | APE_1816.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Fumarate hydratase class II. | 0.730 |
| APE_0689.1 | mdh | APE_0689.1 | APE_0672.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Can also oxidize tartrate. Can utilize both NAD and NADP. Catalytic efficiency for malate oxidation is 3-fold higher with NADP. Belongs to the LDH/MDH superfamily. | 0.954 |
| APE_0689.1 | sdhA | APE_0689.1 | APE_0950.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Succinate dehydrogenase subunit A. | 0.818 |
| APE_0689.1 | sdhB | APE_0689.1 | APE_0946 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Succinate dehydrogenase subunit B. | 0.887 |
| APE_0689.1 | sdhC | APE_0689.1 | APE_0948.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Succinate dehydrogenase subunit C. | 0.689 |
| APE_0689.1 | sdhD | APE_0689.1 | APE_0947 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | Putative succinate dehydrogenase subunit D. | 0.553 |
| APE_0689.1 | sucC | APE_0689.1 | APE_1065.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.958 |
| APE_0689.1 | sucD | APE_0689.1 | APE_1072.1 | Isocitrate dehydrogenase [NADP]; NADP-IDH. | succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.898 |
| APE_0929.1 | APE_1472 | APE_0929.1 | APE_1472 | Putative 3-ketoacyl-CoA thiolase. | 2-oxoacid:ferredoxin oxidoreductase beta subunit; Catalyzes the coenzyme A-dependent oxidative decarboxylation of different 2-oxoacids such as pyruvate, 2-oxobutyrate, glyoxylate and 2-oxoglutarate to form their CoA derivatives. | 0.905 |
| APE_0929.1 | APE_1473.1 | APE_0929.1 | APE_1473.1 | Putative 3-ketoacyl-CoA thiolase. | 2-oxoacid:ferredoxin oxidoreductase alpha subunit; Catalyzes the coenzyme A-dependent oxidative decarboxylation of different 2-oxoacids such as pyruvate, 2-oxobutyrate, glyoxylate and 2-oxoglutarate to form their CoA derivatives. | 0.907 |
| APE_0929.1 | APE_1484.1 | APE_0929.1 | APE_1484.1 | Putative 3-ketoacyl-CoA thiolase. | 3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA dehydratase. | 0.992 |
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