Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE_0562.1 | APE_0583 | APE_0562.1 | APE_0583 | Putative prephenate dehydrogenase. | Putative transketolase C-terminal section. | 0.815 |
| APE_0562.1 | APE_0586.1 | APE_0562.1 | APE_0586.1 | Putative prephenate dehydrogenase. | Putative transketolase N-terminal section. | 0.738 |
| APE_0562.1 | aroA | APE_0562.1 | APE_0569 | Putative prephenate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.877 |
| APE_0562.1 | aroA-2 | APE_0562.1 | APE_1404.1 | Putative prephenate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase. | 0.517 |
| APE_0562.1 | aroB | APE_0562.1 | APE_0579 | Putative prephenate dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | 0.903 |
| APE_0562.1 | aroC | APE_0562.1 | APE_0564 | Putative prephenate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.899 |
| APE_0562.1 | aroD | APE_0562.1 | APE_0577 | Putative prephenate dehydrogenase. | 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.866 |
| APE_0562.1 | aroE | APE_0562.1 | APE_0574.1 | Putative prephenate dehydrogenase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.866 |
| APE_0562.1 | aroG | APE_0562.1 | APE_0581.1 | Putative prephenate dehydrogenase. | Phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.869 |
| APE_0562.1 | aroK | APE_0562.1 | APE_0572 | Putative prephenate dehydrogenase. | Shikimate kinase. | 0.912 |
| APE_0562.1 | aspC | APE_0562.1 | APE_0674.1 | Putative prephenate dehydrogenase. | Aspartate aminotransferase; Transaminase A. | 0.919 |
| APE_0562.1 | aspC-2 | APE_0562.1 | APE_2248.1 | Putative prephenate dehydrogenase. | Aspartate aminotransferase; Transaminase A. | 0.919 |
| APE_0562.1 | cobD | APE_0562.1 | APE_2035.1 | Putative prephenate dehydrogenase. | Threonine-phosphate decarboxylase. | 0.919 |
| APE_0562.1 | hom | APE_0562.1 | APE_1144.1 | Putative prephenate dehydrogenase. | Homoserine dehydrogenase; HDH. | 0.417 |
| APE_0562.1 | lysC | APE_0562.1 | APE_1140.1 | Putative prephenate dehydrogenase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.418 |
| APE_0562.1 | trpF | APE_0562.1 | APE_2547 | Putative prephenate dehydrogenase. | N-(5'-phosphoribosyl) anthranilate isomerase; Belongs to the TrpF family. | 0.434 |
| APE_0583 | APE_0562.1 | APE_0583 | APE_0562.1 | Putative transketolase C-terminal section. | Putative prephenate dehydrogenase. | 0.815 |
| APE_0583 | APE_0586.1 | APE_0583 | APE_0586.1 | Putative transketolase C-terminal section. | Putative transketolase N-terminal section. | 0.999 |
| APE_0583 | apgM | APE_0583 | APE_1616.1 | Putative transketolase C-terminal section. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.800 |
| APE_0583 | aroA | APE_0583 | APE_0569 | Putative transketolase C-terminal section. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.753 |
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