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BPSL0699 BPSL0699 BPSL2965 BPSL2965 BPSL2969 BPSL2969 BPSL2970 BPSL2970 BPSL2971 BPSL2971 BPSL2972 BPSL2972 BPSS0776 BPSS0776 BPSS1476 BPSS1476 rspA rspA rspB rspB BPSS2074 BPSS2074
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSL0699Similar to Rhizobium meliloti probable galactonate dehydratase protein dgoA or rb0492 or smb20510 SWALL:Q92W53 (EMBL:AL603643) (382 aa) fasta scores: E(): 3.3e-125, 78.27% id in 382 aa, and to Ralstonia solanacearum putative galactonate dehydratase protein dgoAB or rsc2751 or rs00103 SWALL:Q8XVS8 (EMBL:AL646071) (382 aa) fasta scores: E(): 4e-101, 64.92% id in 382 aa. (382 aa)
BPSL2965Putative dehydrogenase; Similar to Pseudomonas paucimobilis 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinX SWALL:LINX_PSEPA (SWALL:P50198) (250 aa) fasta scores: E(): 3.4e-20, 34.41% id in 247 aa, and to Rhizobium meliloti probable oxidoreductase protein r00826 or smc00880 SWALL:Q92RN6 (EMBL:AL591785) (256 aa) fasta scores: E(): 5.6e-39, 48.19% id in 249 aa. Note: This CDS is longer in its N-terminal region than most of its database matches. (268 aa)
BPSL2969Putative dehydrogenase; Similar to Rhizobium loti probable oxidoreductase mll7083 SWALL:Q987E5 (EMBL:AP003010) (258 aa) fasta scores: E(): 1.8e-54, 61.86% id in 257 aa, and to Escherichia coli oxidoreductase UcpA or b2426 SWALL:UCPA_ECOLI (SWALL:P37440) (263 aa) fasta scores: E(): 1.6e-27, 40% id in 260 aa. (259 aa)
BPSL2970Putative aldolase; Similar to Rhizobium loti 2-dehydro-3-deoxyphosphogluconate aldolase mlr4743 SWALL:Q98DE1 (EMBL:AP003004) (212 aa) fasta scores: E(): 2e-26, 47.91% id in 192 aa, and to the N-terminal region of Escherichia coli DgoA protein [includes: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) (6-phospho-2-dehydro-3-deoxygalactonate aldolase) (2-oxo-3-deoxygalactonate 6-phosphate aldolase); galactonate dehydratase (EC 4.2.1.6)] or DgoD or b3692 SWALL:DGOA_ECOLI (SWALL:P31458) (587 aa) fasta scores: E(): 6e-18, 41.62% id in 209 aa. (209 aa)
BPSL2971Similar to Rhizobium meliloti putative 2-dehydro-3-deoxygalactonokinase ra0372 or sma0705 SWALL:Q92ZS7 (EMBL:AE007229) (324 aa) fasta scores: E(): 8.4e-24, 38.22% id in 327 aa, and to Escherichia coli 2-dehydro-3-deoxygalactonokinase DgoK or b3693 SWALL:DGOK_ECOLI (SWALL:P31459) (292 aa) fasta scores: E(): 1.3e-09, 34.16% id in 319 aa. (337 aa)
BPSL2972Putative IclR-family regulatory protein; Similar to Escherichia coli transcriptional regulator KdgR or b1827 SWALL:KDGR_ECOLI (SWALL:P76268) (263 aa) fasta scores: E(): 6.3e-18, 33.46% id in 263 aa, and CFT073 putative transcriptional regulator c4779 SWALL:AAN83212 (EMBL:AE016770) (284 aa) fasta scores: E(): 1.2e-27, 56.64% id in 256 aa. (305 aa)
BPSS0776Putative sugar transport system permease protein (fragment); 2 probable transmembrane helices predicted for BPSS0775 by TMHMM2.0 at aa 7-29 and 39-61. (311 aa)
BPSS1476Similar to Pseudomonas fluorescens mannitol 2-dehydrogenase MtlD SWALL:O08355 (EMBL:AF007800) (493 aa) fasta scores: E(): 2.3e-53, 38.74% id in 431 aa, and to Brucella melitensis D-mannonate oxidoreductase bmeII0478 SWALL:Q8YCQ0 (EMBL:AE009684) (502 aa) fasta scores: E(): 3.1e-68, 44.9% id in 461 aa, and to Rhizobium meliloti putative D-mannonate oxidoreductase protein UxuB or rb1441 or smb20749 SWALL:Q92TQ9 (EMBL:AL603647) (487 aa) fasta scores: E(): 3.9e-67, 45.16% id in 476 aa. (489 aa)
rspAPutative mandelate racemase/muconate lactonizing enzyme; Similar to Escherichia coli starvation sensing protein RspA or b1581 SWALL:RSPA_ECOLI (SWALL:P38104) (404 aa) fasta scores: E(): 4.3e-108, 65.84% id in 404 aa, and to Caulobacter crescentus mandelate racemase / muconate lactonizing enzyme family cc2812 SWALL:Q9A4L8 (EMBL:AE005947) (403 aa) fasta scores: E(): 3.6e-113, 70.82% id in 401 aa, and to Xanthomonas campestris starvation sensing protein rspa or xcc4104 SWALL:AAM43325 (EMBL:AE012534) (419 aa) fasta scores: E(): 5.4e-109, 69.36% id in 395 aa. (402 aa)
rspBPutative zinc-containing alcohol dehydrogenase; Similar to Escherichia coli starvation sensing protein RspB or b1580 SWALL:RSPB_ECOLI (SWALL:P38105) (339 aa) fasta scores: E(): 4.3e-69, 52.33% id in 342 aa, and to Salmonella typhimurium putative dehydrogenase RspB or stm1506 SWALL:Q8ZPJ0 (EMBL:AE008765) (339 aa) fasta scores: E(): 7.5e-69, 52.92% id in 342 aa, and to Bacillus subtilis zinc-containing alcohol dehydrogenase YjmD SWALL:O35045 (EMBL:AF015825) (339 aa) fasta scores: E(): 3.2e-43, 38.01% id in 342 aa. (343 aa)
BPSS2074Similar to Oryctolagus cuniculus senescence marker protein-30 RGM or SMP30 SWALL:SM30_RABIT (SWALL:Q9TTJ6) (299 aa) fasta scores: E(): 2.7e-21, 29.73% id in 296 aa, and to Rhizobium loti regucalcin homolog mlr7379 SWALL:Q986F6 (EMBL:AP003011) (301 aa) fasta scores: E(): 1.7e-37, 40.83% id in 289 aa. (296 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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