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amrR amrR BPSL3085 BPSL3085 BPSL3086 BPSL3086 BPSS1333 BPSS1333 BPSS1334 BPSS1334 BPSS1335 BPSS1335
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
amrRTetR family regulatory protein; Almost identical to Burkholderia pseudomallei regulator AmrR SWALL:O87934 (EMBL:AF072887) (187 aa) fasta scores: E(): 1e-64, 99.42% id in 173 aa. Similar to Ralstonia solanacearum putative AcrAB operon repressor transcription regulator protein AcrR or rsc0012 or rs01834 SWALL:Q8Y3G8 (EMBL:AL646057) (219 aa) fasta scores: E(): 4.2e-21, 38.22% id in 225 aa. Note: This CDS is longer than the previously sequenced AmrR in its C-terminal region, it is possible that the previous sequence submitted to the databases had a sequencing error that led to a frameshift [...] (223 aa)
BPSL3085Similar to Ralstonia solanacearum hypothetical protein Rsc3157 or Rs00441 SWALL:Q8XUN0 (EMBL:AL646074) (278 aa) fasta scores: E(): 5e-95, 83.75% id in 277 aa. (298 aa)
BPSL3086Similar to Ralstonia solanacearum hypothetical protein Rsc3159 or Rs00439 SWALL:Q8XUM8 (EMBL:AL646074) (376 aa) fasta scores: E(): 3.1e-114, 75.92% id in 378 aa, and to Neisseria meningitidis hypothetical protein Nma1400 SWALL:Q9JUB9 (EMBL:AL162755) (331 aa) fasta scores: E(): 5.3e-57, 49.54% id in 329 aa; Belongs to the methyltransferase superfamily. (396 aa)
BPSS1333Conserved hypothetical protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (286 aa)
BPSS1334Similar to Ralstonia solanacearum hypothetical protein rsp0427 or rs00886 SWALL:Q8XSP0 (EMBL:AL646078) (91 aa) fasta scores: E(): 7.9e-10, 44.94% id in 89 aa. (90 aa)
BPSS1335Similar to Ralstonia solanacearum hypothetical protein rsc0762 or rs05091 SWALL:Q8Y1C8 (EMBL:AL646060) (68 aa) fasta scores: E(): 2.5e-19, 86.27% id in 51 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0200 SWALL:Q9I6T8 (EMBL:AE004458) (70 aa) fasta scores: E(): 1.2e-17, 65.21% id in 69 aa. (70 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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