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BPSL0819 BPSL0819 BPSL2908 BPSL2908 BPSS0681 BPSS0681 BPSS1322 BPSS1322 BPSS1424 BPSS1424 BPSS1824 BPSS1824
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSL0819AraC family transcriptional regulator; Similar to Streptomyces griseus A-factor-responsive transcriptional activator AdpA SWALL:Q9S166 (EMBL:AB023785) (405 aa) fasta scores: E(): 2.1e-30, 36.33% id in 322 aa, and to Streptomyces coelicolor putative transcriptional regulator sco6746 or sc5f2a.29 SWALL:Q9X7Q2 (EMBL:AL049587) (325 aa) fasta scores: E(): 2.9e-43, 41.94% id in 329 aa; Alternative start site at codon 33; upstream repeat region (ggcgc)3. (344 aa)
BPSL2908Similar to Xylella fastidiosa transcriptional regulator xf1254 SWALL:Q9PDX5 (EMBL:AE003959) (280 aa) fasta scores: E(): 1.7e-34, 42.22% id in 270 aa, and to Streptomyces antibioticus putative AraC-like transcription regulator SWALL:ARAL_STRAT (SWALL:Q03320) (303 aa) fasta scores: E(): 1.7e-15, 37.44% id in 219 aa. (300 aa)
BPSS0681AraC family regulatory protein; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2047 SWALL:Q9I268 (EMBL:AE004631) (329 aa) fasta scores: E(): 1.8e-49, 47.72% id in 329 aa, and weakly similar to Pseudomonas aeruginosa regulatory protein AraC family activator of pyochelin and ferripyochelin receptor synthesis PchR SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) fasta scores: E(): 7.7e-06, 24.25% id in 301 aa. (327 aa)
BPSS1322Putative AraC family transcriptional regulatory protein; Similar to Lactococcus lactis xylose regulatory protein XylR SWALL:Q9X421 (EMBL:AF092042) (319 aa) fasta scores: E(): 3.4e-05, 20.28% id in 281 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3269 SWALL:Q9HYX2 (EMBL:AE004749) (284 aa) fasta scores: E(): 7e-24, 33.81% id in 275 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu1081 or agr_c_1998 SWALL:Q8UGF7 (EMBL:AE009072) (285 aa) fasta scores: E(): 3e-23, 33.08% id in 272 aa. (290 aa)
BPSS1424Putative AraC transcriptional regulatory protein; Similar to Pseudomonas syringae arginine pathway regulatory protein ArgR SWALL:Q8VVB2 (EMBL:AF443787) (354 aa) fasta scores: E(): 4.9e-35, 40% id in 315 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 2.1e-97, 76.2% id in 332 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 2.4e-67, 56.82% id in 315 aa. (332 aa)
BPSS1824Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3220 SWALL:Q9HZ20 (EMBL:AE004745) (254 aa) fasta scores: E(): 3.8e-21, 37.4% id in 254 aa, and to Photobacterium leiognathi probable transcriptional regulator LumQ SWALL:LUMQ_PHOLE (SWALL:Q51872) (248 aa) fasta scores: E(): 9.7e-13, 24.59% id in 248 aa. (255 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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