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BPSL1714 BPSL1714 kbl kbl tdh tdh ltaE ltaE BPSS0546 BPSS0546 BPSS0548 BPSS0548 BPSS0549 BPSS0549 BPSS0550 BPSS0550 BPSS0551 BPSS0551 BPSS0552 BPSS0552 BPSS0553 BPSS0553 BPSS0554 BPSS0554 BPSS0555 BPSS0555 soxG soxG soxA soxA soxD soxD soxB soxB BPSS1371 BPSS1371
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSL1714Similar to Aeromonas jandaei L-allo-threonine aldolase LtaA SWALL:LTAA_AERJA (SWALL:O07051) (338 aa) fasta scores: E(): 4.2e-54, 50.59% id in 334 aa, and to Escherichia coli low-specificity L-threonine aldolase LtaE or b0870 SWALL:LTAE_ECOLI (SWALL:P75823) (333 aa) fasta scores: E(): 6.7e-41, 40.58% id in 340 aa. Note: this CDS is longer in its N-terminal region than most of its database matches. (386 aa)
kbl2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (399 aa)
tdhThreonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. (343 aa)
ltaEL-allo-threonine aldolase; Similar to Escherichia coli low-specificity L-threonine aldolase LtaE or b0870 SWALL:LTAE_ECOLI (SWALL:P75823) (333 aa) fasta scores: E(): 1.4e-68, 58.98% id in 334 aa, and to Salmonella typhimurium LT2 L-allo-threonine aldolase LtaA SWALL:Q8ZQF1 (EMBL:AE008737) (333 aa) fasta scores: E(): 1.3e-70, 61.07% id in 334 aa. (337 aa)
BPSS0546AraC family regulatory protein; Similar to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 5.7e-114, 85.71% id in 336 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 1.5e-65, 55.12% id in 312 aa. Similar to BPSS1424, 56.913% identity (57.097% ungapped) in 311 aa overlap. (341 aa)
BPSS0548Family M19 non-peptidase homologue; Similar to Ralstonia solanacearum putative dipeptidase protein rsp0056 or rs02031 SWALL:Q8XTQ0 (EMBL:AL646076) (323 aa) fasta scores: E(): 1.7e-119, 90.4% id in 323 aa, and to Pseudomonas aeruginosa hypothetical protein pa5396 SWALL:Q9HTG8 (EMBL:AE004952) (325 aa) fasta scores: E(): 1.1e-94, 71.47% id in 319 aa. (323 aa)
BPSS0549Similar to Ralstonia solanacearum hypothetical protein rsp0057 or rs02032 SWALL:Q8XTP9 (EMBL:AL646076) (177 aa) fasta scores: E(): 8.8e-72, 90.85% id in 175 aa, and to Pseudomonas aeruginosa hypothetical protein pa5397 SWALL:Q9HTG7 (EMBL:AE004952) (176 aa) fasta scores: E(): 1e-39, 57.71% id in 175 aa. (177 aa)
BPSS0550NADH:flavin oxidoreductase / NADH oxidase family protein; Similar to Rhizobium meliloti probable N-methylproline demethylase StcD or StcD2 or rb1010 or smb21570 SWALL:STCD_RHIME (SWALL:O87278) (678 aa) fasta scores: E(): 2.6e-101, 43.61% id in 681 aa, and to Ralstonia solanacearum probable stachydrine utilization oxidoreductase protein rsp0058 or rs02033 SWALL:Q8XTP8 (EMBL:AL646076) (687 aa) fasta scores: E(): 0, 94.46% id in 687 aa. (687 aa)
BPSS0551Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsp0059 or rs02034 SWALL:Q8XTP7 (EMBL:AL646076) (641 aa) fasta scores: E(): 1.6e-211, 86.73% id in 641 aa. C-terminal region os weakly similar to Escherichia coli anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC SWALL:GLPC_ECOLI (SWALL:P13034) (396 aa) fasta scores: E(): 0.0036, 22.41% id in 415 aa. (641 aa)
BPSS0552Putative electron transfer flavoprotein alpha-subunit; CDS is extended at the N-terminus in comparison to most orthologues. C-terminal region is similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit EtfA or EtfL SWALL:ETFA_BRAJA (SWALL:P53573) (314 aa) fasta scores: E(): 3.2e-14, 30.35% id in 313 aa. Full length CDS is similar to Ralstonia solanacearum putative electron transfer flavoprotein alpha-subunit rsp0060 or rs02035 SWALL:Q8XTP6 (EMBL:AL646076) (392 aa) fasta scores: E(): 2.1e-98, 71.89% id in 395 aa. Possible alternative translational start site. (390 aa)
BPSS0553Putative electron transfer flavoprotein beta-subunit; C-terminus is similar to the C-terminal region of Methylophilus methylotrophus electron transfer flavoprotein beta-subunit EtfB SWALL:ETFB_METME (SWALL:P53570) (264 aa) fasta scores: E(): 0.11, 27.92% id in 222 aa. Full length CDS is similar to Ralstonia solanacearum putative electron transfer flavoprotein beta-subunit rsp0061 or rs02036 SWALL:Q8XTP5 (EMBL:AL646076) (261 aa) fasta scores: E(): 6.7e-70, 77.39% id in 261 aa. (261 aa)
BPSS0554Iron-sulphur Rieske protein; Similar to Ralstonia solanacearum putative dioxygenase rsp0062 or rs02037 SWALL:Q8XTP4 (EMBL:AL646076) (414 aa) fasta scores: E(): 9.8e-153, 84.42% id in 411 aa, and to Pseudomonas aeruginosa probable ring hydroxylating dioxygenase, alpha-subunit pa5410 SWALL:Q9HTF4 (EMBL:AE004953) (429 aa) fasta scores: E(): 4e-73, 43.81% id in 420 aa. Possible alternative translational start site. (422 aa)
BPSS0555Similar to Ralstonia solanacearum probable ferredoxin oxidoreductase protein rsp0063 or rs02038 SWALL:Q8XTP3 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.7e-133, 84.81% id in 382 aa, and to the C-terminal region of Escherichia coli probable phenylacetic acid degradation NADH oxidoreductase PaaE paae or b1392 SWALL:PAAE_ECOLI (SWALL:P76081) (356 aa) fasta scores: E(): 1.3e-21, 31.56% id in 358 aa. (381 aa)
soxGSimilar to Corynebacterium sp. sarcosine oxidase gamma subunit SoxG SWALL:SOXG_CORS1 (SWALL:Q46338) (203 aa) fasta scores: E(): 1.6e-11, 32.98% id in 191 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxG2 or rsc1104 or rs04053 SWALL:Q8Y0E0 (EMBL:AL646062) (210 aa) fasta scores: E(): 2.8e-62, 75.71% id in 210 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxG1 or rsp0049 or rs02024 SWALL:Q8XTQ7 (EMBL:AL646076) (210 aa) fasta scores: E(): 2.8e-59, 73.81% id in 210 aa. (211 aa)
soxASimilar to Corynebacterium sp. sarcosine oxidase alpha subunit SoxA SWALL:SOXA_CORS1 (SWALL:Q46337) (967 aa) fasta scores: E(): 2.3e-145, 46.45% id in 1014 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxA2 or rsc1103 or rs04054 SWALL:Q8Y0E1 (EMBL:AL646062) (1003 aa) fasta scores: E(): 0, 86.14% id in 1003 aa, and to Pseudomonas aeruginosa sarcosine oxidase alpha subunit SoxA or pa5418 SWALL:Q9HTE6 (EMBL:AE004954) (1005 aa) fasta scores: E(): 1.3e-211, 57.46% id in 1011 aa; Belongs to the GcvT family. (1002 aa)
soxDSimilar to Corynebacterium sp. sarcosine oxidase delta subunit SoxD SWALL:SOXD_CORS1 (SWALL:Q46336) (98 aa) fasta scores: E(): 1.9e-19, 55.81% id in 86 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxD2 or rsc1102 or rs04055 SWALL:Q8Y0E2 (EMBL:AL646062) (98 aa) fasta scores: E(): 3.4e-31, 76.66% id in 90 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxD1 or rsp0047 or rs02022 SWALL:Q8XTQ9 (EMBL:AL646076) (107 aa) fasta scores: E(): 6.9e-30, 74.72% id in 91 aa. (96 aa)
soxBSimilar to Corynebacterium sp. sarcosine oxidase beta subunit SoxB SWALL:SOXB_CORS1 (SWALL:P40875) (405 aa) fasta scores: E(): 1.1e-105, 65.91% id in 399 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxB1 or rsp0046 or rs06046 SWALL:Q8XTR0 (EMBL:AL646076) (414 aa) fasta scores: E(): 3.8e-157, 95.65% id in 414 aa, and to Ralstonia solanacearum probable sarcosine oxidase SoxB2 or rsc1101 or rs04056 SWALL:Q8Y0E3 (EMBL:AL646062) (414 aa) fasta scores: E(): 1.6e-156, 94.92% id in 414 aa. (414 aa)
BPSS1371Putative AraC family transcriptional regulator; Similar to Streptomyces griseus transcriptional regulator AdpA SWALL:Q9S166 (EMBL:AB023785) (405 aa) fasta scores: E(): 3.6e-18, 30.97% id in 339 aa, and to Ralstonia solanacearum probable transcriptional regulatory DNA-binding transcription regulator protein rsc1098 or rs04066 SWALL:Q8Y0E6 (EMBL:AL646062) (360 aa) fasta scores: E(): 8.7e-115, 84.4% id in 359 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0044 or rs02019 SWALL:Q8XTR2 (EMBL:AL646076) (387 aa) fasta scores: E(): 1.2e-111, 82.81% id in 355 aa. [...] (388 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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