STRINGSTRING
BPSS0550 BPSS0550 BPSS0551 BPSS0551 BPSS0552 BPSS0552 BPSS0553 BPSS0553 BPSS0554 BPSS0554 BPSS0555 BPSS0555
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSS0550NADH:flavin oxidoreductase / NADH oxidase family protein; Similar to Rhizobium meliloti probable N-methylproline demethylase StcD or StcD2 or rb1010 or smb21570 SWALL:STCD_RHIME (SWALL:O87278) (678 aa) fasta scores: E(): 2.6e-101, 43.61% id in 681 aa, and to Ralstonia solanacearum probable stachydrine utilization oxidoreductase protein rsp0058 or rs02033 SWALL:Q8XTP8 (EMBL:AL646076) (687 aa) fasta scores: E(): 0, 94.46% id in 687 aa. (687 aa)
BPSS0551Putative membrane protein; Similar to Ralstonia solanacearum probable transmembrane protein rsp0059 or rs02034 SWALL:Q8XTP7 (EMBL:AL646076) (641 aa) fasta scores: E(): 1.6e-211, 86.73% id in 641 aa. C-terminal region os weakly similar to Escherichia coli anaerobic glycerol-3-phosphate dehydrogenase subunit C GlpC SWALL:GLPC_ECOLI (SWALL:P13034) (396 aa) fasta scores: E(): 0.0036, 22.41% id in 415 aa. (641 aa)
BPSS0552Putative electron transfer flavoprotein alpha-subunit; CDS is extended at the N-terminus in comparison to most orthologues. C-terminal region is similar to Bradyrhizobium japonicum electron transfer flavoprotein alpha-subunit EtfA or EtfL SWALL:ETFA_BRAJA (SWALL:P53573) (314 aa) fasta scores: E(): 3.2e-14, 30.35% id in 313 aa. Full length CDS is similar to Ralstonia solanacearum putative electron transfer flavoprotein alpha-subunit rsp0060 or rs02035 SWALL:Q8XTP6 (EMBL:AL646076) (392 aa) fasta scores: E(): 2.1e-98, 71.89% id in 395 aa. Possible alternative translational start site. (390 aa)
BPSS0553Putative electron transfer flavoprotein beta-subunit; C-terminus is similar to the C-terminal region of Methylophilus methylotrophus electron transfer flavoprotein beta-subunit EtfB SWALL:ETFB_METME (SWALL:P53570) (264 aa) fasta scores: E(): 0.11, 27.92% id in 222 aa. Full length CDS is similar to Ralstonia solanacearum putative electron transfer flavoprotein beta-subunit rsp0061 or rs02036 SWALL:Q8XTP5 (EMBL:AL646076) (261 aa) fasta scores: E(): 6.7e-70, 77.39% id in 261 aa. (261 aa)
BPSS0554Iron-sulphur Rieske protein; Similar to Ralstonia solanacearum putative dioxygenase rsp0062 or rs02037 SWALL:Q8XTP4 (EMBL:AL646076) (414 aa) fasta scores: E(): 9.8e-153, 84.42% id in 411 aa, and to Pseudomonas aeruginosa probable ring hydroxylating dioxygenase, alpha-subunit pa5410 SWALL:Q9HTF4 (EMBL:AE004953) (429 aa) fasta scores: E(): 4e-73, 43.81% id in 420 aa. Possible alternative translational start site. (422 aa)
BPSS0555Similar to Ralstonia solanacearum probable ferredoxin oxidoreductase protein rsp0063 or rs02038 SWALL:Q8XTP3 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.7e-133, 84.81% id in 382 aa, and to the C-terminal region of Escherichia coli probable phenylacetic acid degradation NADH oxidoreductase PaaE paae or b1392 SWALL:PAAE_ECOLI (SWALL:P76081) (356 aa) fasta scores: E(): 1.3e-21, 31.56% id in 358 aa. (381 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.