Your Input: | |
| | mnmC | Conserved hypothetical protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the N-terminal section; belongs to the methyltransferase superfamily. tRNA (mnm(5)s(2)U34)-methyltransferase family. (684 aa) |
| | BPSL0034 | Similar to Rhizobium loti hypothetical protein MLR5379 SWALL:Q98BY2 (EMBL:AP003006) (281 aa) fasta scores: E(): 3.2e-50, 51.29% id in 271 aa, and to Caulobacter crescentus methlytransferase, UbiE-Coq5 family CC3495 SWALL:Q9A2R1 (EMBL:AE006008) (276 aa) fasta scores: E(): 2.6e-42, 46.46% id in 269 aa. (291 aa) |
| | BPSL0042 | Similar to Escherichia coli type III restriction-modification system EcoP15I enzyme Mod SWALL:T3MO_ECOLI (SWALL:P12364) (645 aa) fasta scores: E(): 3.5e-39, 30.38% id in 655 aa, and to Chlorobium tepidum TLS type III restriction system methylase Mod SWALL:AAM72143 (EMBL:AE012856) (669 aa) fasta scores: E(): 1.7e-190, 67.66% id in 671 aa. (670 aa) |
| | BPSL0100 | O6-methylguanine-DNA methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Belongs to the MGMT family. (364 aa) |
| | sun | NOL1/NOP2/Sun family protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. (469 aa) |
| | BPSL0157 | Similar to Brucella abortus modification methylase CcrM SWALL:MTB1_BRUAB (SWALL:O30570) (377 aa) fasta scores: E(): 4.1e-06, 31.66% id in 259 aa, and to Xanthomonas campestris pv. campestris str. ATCC 33913 site-specific DNA-methyltransferase xcc2967 SWALL:AAM42239 (EMBL:AE012411) (234 aa) fasta scores: E(): 1.3e-37, 47.21% id in 233 aa. Similar to BPSS1077, 95.926% identity (95.926% ungapped) in 270 aa overlap; Belongs to the N(4)/N(6)-methyltransferase family. (252 aa) |
| | BPSL0196 | Similar to Ralstonia solanacearum hypothetical protein rsc0026 or rs01849 SWALL:Q8Y3F4 (EMBL:AL646057) (215 aa) fasta scores: E(): 1.1e-59, 75.25% id in 194 aa, and to Neisseria meningitidis hypothetical protein NMB0939 SWALL:Q9JZQ6 (EMBL:AE002445) (193 aa) fasta scores: E(): 9.1e-32, 46.87% id in 192 aa. (204 aa) |
| | BPSL0207 | Similar to Ralstonia solanacearum hypothetical protein rsc0051 or rs01874 SWALL:Q8Y3C9 (EMBL:AL646057) (397 aa) fasta scores: E(): 2.2e-80, 71.46% id in 424 aa, and to Yersinia pestis hypothetical protein YPO1445 SWALL:Q8ZG67 (EMBL:AJ414148) (396 aa) fasta scores: E(): 3.7e-45, 41.33% id in 421 aa. (425 aa) |
| | BPSL0317 | Similar to Ralstonia solanacearum hypothetical protein rsc0155 or rs01025 SWALL:Q8Y326 (EMBL:AL646057) (397 aa) fasta scores: E(): 1.5e-78, 56.52% id in 391 aa, and to Neisseria meningitidis hypothetical protein nma2076 SWALL:Q9JSY7 (EMBL:AL162758) (405 aa) fasta scores: E(): 4.7e-58, 47.69% id in 390 aa. (396 aa) |
| | metH1 | Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (900 aa) |
| | metH2 | Similar to Ralstonia solanacearum probable 5-methyltetrahydrofolate--homocysteine methyltransferase rsc0295 or rs03262 SWALL:Q8Y2P0 (EMBL:AL646058) (346 aa) fasta scores: E(): 2.9e-107, 80.29% id in 345 aa, and to the N-terminal region Escherichia coli 5-methyltetrahydrofolate--homocysteine methyltransferase MetH SWALL:METH_ECOLI (SWALL:P13009) (1226 aa) fasta scores: E(): 3.2e-72, 59.07% id in 325 aa. BPSL0385 and BPSL03856 are similar to the N- and C-terminal regions of many 5-methyltetrahydrofolate--homocysteine methyltransferases. In some organisms these two domains are also found [...] (359 aa) |
| | trmL | SpoU rRNA methylase family protein; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. (156 aa) |
| | bioC | Conserved hypothetical protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. (321 aa) |
| | BPSL0481 | Hypothetical protein; Similar to the N-terminal regions of Deinococcus radiodurans putative methyltransferase dr0026 SWALL:Q9RYC4 (EMBL:AE001866) (269 aa) fasta scores: E(): 1.1e-08, 36.36% id in 209 aa, and Amycolatopsis mediterranei methyltransferase SWALL:O52570 (EMBL:AF040570) (272 aa) fasta scores: E(): 1.5e-05, 30.8% id in 224 aa. (221 aa) |
| | BPSL0515 | Similar to Ralstonia solanacearum hypothetical protein rsc0389 or rs03357 SWALL:Q8Y2E7 (EMBL:AL646059) (215 aa) fasta scores: E(): 3.1e-31, 52.31% id in 216 aa, and to Xanthomonas campestris hypothetical protein xcc2392 SWALL:AAM41670 (EMBL:AE012348) (207 aa) fasta scores: E(): 6.3e-24, 47.57% id in 206 aa. (208 aa) |
| | ubiE | Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (243 aa) |
| | BPSL0641 | Similar to Ralstonia solanacearum hypothetical protein rsc0462 or rs04436 SWALL:Q8Y274 (EMBL:AL646059) (209 aa) fasta scores: E(): 3.2e-40, 56.5% id in 200 aa. Weakly similar to Arabidopsis thaliana AT2G43920 protein SWALL:O80562 (EMBL:AC004005) (227 aa) fasta scores: E(): 1.8e-10, 28.3% id in 212 aa. CDS is extended at the N-terminus in comparison to R. solanacearum protein. (213 aa) |
| | ksgA | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (275 aa) |
| | BPSL0764 | Hypothetical protein; Weakly similar to Borrelia burgdorferi hypothetical protein bbh09 SWALL:O50667 (EMBL:AE000784) (1278 aa) fasta scores: E(): 5.5e-09, 23.87% id in 490 aa, and Borrelia burgdorferi hypothetical protein bbe02 SWALL:O50698 (EMBL:AE000785) (1277 aa) fasta scores: E(): 1.1e-08, 23.82% id in 491 aa. (1414 aa) |
| | BPSL0862 | Similar to Salmonella typhimurium, and Salmonella typhi methylated-DNA--protein-cysteine methyltransferase Ogt or stm1659 or sty1405 SWALL:OGT_SALTY (SWALL:P37429) (171 aa) fasta scores: E(): 2.7e-12, 43.18% id in 132 aa, and to Ralstonia solanacearum probable methylated-DNA--protein-cysteine methyltransferase rsc2543 or rs00722 SWALL:Q8XWD1 (EMBL:AL646070) (173 aa) fasta scores: E(): 2.6e-38, 57.31% id in 164 aa, and to Chlorobium tepidum methylated-DNA-protein-cysteine methyltransferase ct1289 SWALL:AAM72519 (EMBL:AE012888) (165 aa) fasta scores: E(): 1.2e-15, 39.86% id in 148 aa. (174 aa) |
| | BPSL0909 | NOL1/NOP2/Sun family protein; Similar to Ralstonia solanacearum hypothetical protein rsc2453 or rs01153 SWALL:Q8XWM1 (EMBL:AL646070) (417 aa) fasta scores: E(): 1.6e-101, 63.78% id in 417 aa, and to Neisseria meningitidis Fmu and Fmv protein, putative nmb1351 SWALL:Q9JZ03 (EMBL:AE002483) (418 aa) fasta scores: E(): 5.9e-75, 52.54% id in 413 aa, and to Neisseria meningitidis sun-family protein nma1563 SWALL:Q9JTZ9 (EMBL:AL162756) (418 aa) fasta scores: E(): 6.5e-73, 51.09% id in 413 aa; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (420 aa) |
| | BPSL0948 | Putative type I restriction-modification methylase; N-terminus is similar to the N-terminal region of Escherichia coli type I restriction enzyme ecoprrI M protein HsdM SWALL:T1MP_ECOLI (SWALL:Q47163) (520 aa) fasta scores: E(): 6.5e-09, 26.65% id in 469 aa. Full length CDS is similar to Caulobacter crescentus type I restriction-modification system, M subunit, putative cc0620 SWALL:Q9AAH8 (EMBL:AE005738) (611 aa) fasta scores: E(): 6.7e-183, 75.36% id in 613 aa. (613 aa) |
| | BPSL0961 | Similar to Paracoccus denitrificans uroporphyrin-III C-methyltransferase NirE SWALL:NIRE_PARDE (SWALL:Q51701) (287 aa) fasta scores: E(): 1.3e-24, 43.75% id in 256 aa, and to the C-terminal region of Escherichia coli, and Escherichia coli O157:H7 siroheme synthase [includes: uroporphyrin-iii c-methyltransferase; precorrin-2 oxidase; ferrochelatase] CysG or b3368 or z4729 or ecs4219 SWALL:CYSG_ECOLI (SWALL:P11098) (457 aa) fasta scores: E(): 4.3e-23, 41.35% id in 237 aa. (278 aa) |
| | BPSL0997 | Putative methyltransferase; Similar to Streptomyces argillaceus O-methyltransferase MtmMI SWALL:Q9R6R8 (EMBL:AF077869) (345 aa) fasta scores: E(): 1.6e-15, 29.54% id in 308 aa, and to Streptomyces sp. JP95 putative methyltransferase GrhL SWALL:AAM33664 (EMBL:AF509565) (343 aa) fasta scores: E(): 1.8e-20, 30.35% id in 313 aa, and to Bos taurus hydroxyindole O-methyltransferase ASMT SWALL:HIOM_BOVIN (SWALL:P10950) (345 aa) fasta scores: E(): 1.3e-19, 30.44% id in 335 aa. (337 aa) |
| | BPSL1012 | Putative biotin biosyntehsis related protein; Similar to Serratia marcescens biotin synthesis protein BioC SWALL:BIOC_SERMA (SWALL:P36571) (255 aa) fasta scores: E(): 2.9e-07, 34.13% id in 167 aa, and to Salmonella typhimurium putative methyltransferase in menaquinone/biotin biosynthesis YafE or stm0259 SWALL:Q8ZRM3 (EMBL:AE008706) (256 aa) fasta scores: E(): 7.8e-44, 52.77% id in 252 aa. (257 aa) |
| | BPSL1016 | Full length similar to Ralstonia solanacearum probable bifunctional: uroporphyrin-III C-methyltransferase and uroporphyrinogen-III synthase transmembrane protein rsc2356 or rs01190 SWALL:Q8XWW4 (EMBL:AL646069) (695 aa) fasta scores: E(): 1.8e-32, 39.35% id in 681 aa, and N-terminal region similar to Pseudomonas aeruginosa uroporphyrinogen-III synthase HemD or pa5259 SWALL:HEM4_PSEAE (SWALL:P48246) (251 aa) fasta scores: E(): 0.0084, 36.8% id in 269 aa, and C-terminal region to Escherichia coli putative uroporphyrin-III C-methyltransferase HemX or b3803 SWALL:HEMX_ECOLI (SWALL:P09127) ( [...] (660 aa) |
| | rlmH | Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (156 aa) |
| | BPSL1343 | Similar to Ralstonia solanacearum hypothetical protein rsc1514 or rs03790 SWALL:Q8XZ90 (EMBL:AL646065) (257 aa) fasta scores: E(): 2e-52, 57.56% id in 238 aa, and to Neisseria meningitidis hypothetical protein nmb1296 SWALL:Q9JZ46 (EMBL:AE002478) (221 aa) fasta scores: E(): 4.1e-15, 33.62% id in 232 aa. (270 aa) |
| | rlmE | Putative ribosomal RNA large subunit methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. (220 aa) |
| | pcm-2 | Putative L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (322 aa) |
| | rlmD | Putative 23S rRNA (uracil-5-)-methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. (465 aa) |
| | rlmN | Conserved hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. (378 aa) |
| | BPSL1581 | Similar to Ralstonia solanacearum hypothetical protein rsp1250 or rs03194 SWALL:Q8XQH5 (EMBL:AL646083) (147 aa) fasta scores: E(): 1.6e-40, 79.72% id in 143 aa. (144 aa) |
| | BPSL1723 | Hypothetical protein; No significant database matches. (366 aa) |
| | BPSL1736 | Putative methyltransferase; Similar to Escherichia coli biotin synthesis protein BioC or b0777 SWALL:BIOC_ECOLI (SWALL:P12999) (251 aa) fasta scores: E(): 1.2e-05, 36.36% id in 110 aa, and to Brucella melitensis ubiquinone/menaquinone biosynthesis methyltransferase UbiE bmei1834 SWALL:Q8YEP4 (EMBL:AE009616) (262 aa) fasta scores: E(): 2e-40, 47.69% id in 239 aa. Note: this CDS is longer in its N-terminal region than most of its database matches. (256 aa) |
| | cobM | Similar to Rhodococcus erythropolis precorrin-4 C11-methyltransferase CobM SWALL:COBM_RHOER (SWALL:Q53138) (249 aa) fasta scores: E(): 3.3e-43, 52.69% id in 241 aa, and to Pseudomonas denitrificans precorrin-4 C11-methyltransferase CobM SWALL:COBM_PSEDE (SWALL:P21922) (253 aa) fasta scores: E(): 1.1e-41, 52.43% id in 246 aa. (241 aa) |
| | cbiD | Putative cobalamin biosynthesis-related protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (363 aa) |
| | cobL | Similar to Pseudomonas denitrificans precorrin-6Y C5,15-methyltransferase [decarboxylating] cobL SWALL:COBL_PSEDE (SWALL:P21921) (413 aa) fasta scores: E(): 7.9e-67, 49.62% id in 401 aa, and to Brucella melitensis precorrin-6Y C5,15-methyltransferase bmei0716 SWALL:Q8YHT0 (EMBL:AE009513) (401 aa) fasta scores: E(): 1.9e-90, 61.71% id in 397 aa. (408 aa) |
| | cobI | Precorrin-2 C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. (244 aa) |
| | cobJ | Similar to Pseudomonas denitrificans precorrin-3b C17-methyltransferase CobJ SWALL:COBJ_PSEDE (SWALL:P21640) (254 aa) fasta scores: E(): 1.1e-35, 52.2% id in 249 aa, and to C-terminal region to Mycobacterium tuberculosis cobalamin biosynthesis protein rv2066 or mt2126 or mtcy49.05 SWALL:COBI_MYCTU (SWALL:Q10677) (508 aa) fasta scores: E(): 1.8e-31, 40% id in 365 aa. (616 aa) |
| | rlmB | Putative tRNA/rRNA methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. (247 aa) |
| | BPSL1898 | Family A24A unassigned peptidase; Similar to the plasmid borne Ralstonia solanacearum probable prepilin peptidase transmembrane protein CpaA2 or rsp1091 or rs02612 SWALL:Q8XQX7 (EMBL:AL646082) (168 aa) fasta scores: E(): 8.9e-11, 38.88% id in 162 aa, and to the C-terminal region of Escherichia coli type 4 prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase (EC 3.4.99.-) (prepilin peptidase); n-methyltransferase (EC 2.1.1.-)] HofD or HopD or HopO or b3335 SWALL:LEP4_ECOLI (SWALL:P25960) (225 aa) fasta scores: E(): 0.0086, 25.67% id in 148 aa. (166 aa) |
| | BPSL2084 | Putative bifunctional protein; N-terminal region similar to Bradyrhizobium sp. nodulation protein NolA SWALL:NOLA_BRASN (SWALL:P50330) (237 aa) fasta scores: E(): 1e-11, 31.78% id in 236 aa, and C-terminal region similar to Rhizobium loti hypothetical protein mlr0915 SWALL:Q98LR1 (EMBL:AP002996) (299 aa) fasta scores: E(): 6.8e-31, 41.69% id in 271 aa. Note: There is a region of approx. 100 residues in between these two regions of similarity that presents no matches to the databases entries. Possible fusion protein; Belongs to the UPF0677 family. (659 aa) |
| | BPSL2144 | Similar to Ralstonia solanacearum putative trna/rRNA methyltransferase protein rsc1419 or rs05273 SWALL:Q8XZH6 (EMBL:AL646064) (259 aa) fasta scores: E(): 2.2e-52, 55.03% id in 258 aa, and to Neisseria meningitidis putative RNA methyltransferase nma1351 SWALL:Q9JUE8 (EMBL:AL162755) (261 aa) fasta scores: E(): 7.7e-30, 41.44% id in 263 aa. (262 aa) |
| | prmB | Putative DNA methylase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily. (307 aa) |
| | trmJ | Putative tRNA/rRNA methyltransferase protein; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. (303 aa) |
| | BPSL2259 | Similar to Ralstonia solanacearum hypothetical protein rsc1144 or rs04609 SWALL:Q8Y0A0 (EMBL:AL646062) (190 aa) fasta scores: E(): 1.1e-37, 61.08% id in 185 aa. (205 aa) |
| | BPSL2447 | Conserved hypothetical protein; Similar to Ralstonia solanacearum probable transmembrane protein rsc1045 or rs04205 SWALL:Q8Y0J8 (EMBL:AL646062) (243 aa) fasta scores: E(): 1e-50, 63.26% id in 245 aa, and to Neisseria meningitidis hypothetical protein nmb1908 SWALL:Q9JXS3 (EMBL:AE002540) (241 aa) fasta scores: E(): 5.3e-38, 51.25% id in 240 aa. (240 aa) |
| | thyA | Putative thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (323 aa) |
| | trmD | tRNA(guanine-n(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (264 aa) |
| | ubiG | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. (232 aa) |
| | BPSL2525 | Conserved hypothetical protein; Similar to several including: Rhizobium loti hypothetical protein Mlr5374 SWALL:Q98BY6 (EMBL:AP003006) (199 aa) fasta scores: E(): 9.8e-26, 47.36% id in 190 aa and to Bradyrhizobium japonicum pPmtA protein pmtA SWALL:Q9LCT2 (EMBL:Y09633) (199 aa) fasta scores: E(): 9.8e-20, 42.28% id in 201 aa. (228 aa) |
| | metE | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (764 aa) |
| | BPSL2640 | Conserved hypothetical protein; Similar to many including: Stigmatella aurantiaca methyl transferase SWALL:Q8RJZ2 (EMBL:AJ421825) (242 aa) fasta scores: E(): 1.9e-61, 61.57% id in 242 aa, Rhizobium loti hypothetical protein Mll3908 SWALL:Q98F67 (EMBL:AP003003) (242 aa) fasta scores: E(): 2.6e-60, 61.98% id in 242 aa and to Brucella melitensis ubiquinone/menaquinone biosynthesis methyltransferase UbiE bmei1834 SWALL:Q8YEP4 (EMBL:AE009616) (262 aa) fasta scores: E(): 4.7e-57, 60.41% id in 240 aa. (242 aa) |
| | trmB | Putative methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (265 aa) |
| | pcm | Similar to Aeropyrum pernix protein-L-isoaspartate O-methyltransferase Pcm or ape1011 SWALL:PIMT_AERPE (SWALL:Q9YDA1) (256 aa) fasta scores: E(): 2e-20, 42.26% id in 194 aa and to Ralstonia solanacearum probable protein-L-isoaspartate O-methyltransferase Pcm or rsc0697 or rs01602 SWALL:Q8Y1J3 (EMBL:AL646060) (216 aa) fasta scores: E(): 3.1e-52, 65.43% id in 217 aa. (217 aa) |
| | wbiD | Previously sequenced as Burkholderia pseudomallei putative O-antigen methyl transferase WbiD SWALL:O69125 (EMBL:AF064070) (574 aa) fasta scores: E(): 0, 99.65% id in 574 aa. Also similar to Burkholderia mallei putative O-antigen methyl transferase WbiD SWALL:Q9AEV1 (EMBL:AY028370) (574 aa) fasta scores: E(): 0, 99.47% id in 574 aa and to Rhizobium loti putative O-antigen methyl transferase mlr7341 SWALL:Q986I5 (EMBL:AP003011) (664 aa) fasta scores: E(): 3.9e-75, 39.27% id in 555 aa. (574 aa) |
| | BPSL2882 | Putative RNA-methylase protein; Similar to Ralstonia solanacearum hypothetical protein rsc2739 or rs00115 SWALL:Q8XVT8 (EMBL:AL646071) (471 aa) fasta scores: E(): 4.1e-74, 53.72% id in 456 aa, and to Neisseria meningitidis hypothetical protein nmb0455 SWALL:Q9K0V4 (EMBL:AE002401) (380 aa) fasta scores: E(): 2.6e-49, 43.06% id in 418 aa; Belongs to the methyltransferase superfamily. (430 aa) |
| | BPSL2956 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (246 aa) |
| | prmA | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (300 aa) |
| | gspO | Type IV prepilin leader peptide type M1; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (309 aa) |
| | mraW | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (313 aa) |
| | hemK | Protein methyltransferase HemK; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (285 aa) |
| | BPSL3085 | Similar to Ralstonia solanacearum hypothetical protein Rsc3157 or Rs00441 SWALL:Q8XUN0 (EMBL:AL646074) (278 aa) fasta scores: E(): 5e-95, 83.75% id in 277 aa. (298 aa) |
| | BPSL3086 | Similar to Ralstonia solanacearum hypothetical protein Rsc3159 or Rs00439 SWALL:Q8XUM8 (EMBL:AL646074) (376 aa) fasta scores: E(): 3.1e-114, 75.92% id in 378 aa, and to Neisseria meningitidis hypothetical protein Nma1400 SWALL:Q9JUB9 (EMBL:AL162755) (331 aa) fasta scores: E(): 5.3e-57, 49.54% id in 329 aa; Belongs to the methyltransferase superfamily. (396 aa) |
| | rsmI | Putative methylase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (295 aa) |
| | cheR | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (315 aa) |
| | gidB | Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (230 aa) |
| | BPSL3422 | Putative adenylate cyclase; Similar to Ralstonia solanacearum hypothetical protein Rsc1389 or Rs04672 SWALL:Q8XZK6 (EMBL:AL646064) (172 aa) fasta scores: E(): 3.3e-24, 48.23% id in 170 aa. (176 aa) |
| | BPSL3428 | Similar to Ralstonia solanacearum hypothetical protein Rsc3358 or Rs02633 SWALL:Q8XU36 (EMBL:AL646074) (179 aa) fasta scores: E(): 1.9e-43, 70.19% id in 151 aa. (170 aa) |
| | BPSS0013 | Putative membrane protein; Similar to Methanosarcina acetivorans hypothetical protein ma2467 SWALL:Q8TN26 (EMBL:AE010940) (237 aa) fasta scores: E(): 2.4e-28, 35.37% id in 229 aa, and to Rhizobium loti hypothetical protein mll0909 SWALL:Q98LR8 (EMBL:AP002996) (244 aa) fasta scores: E(): 9.6e-21, 31.6% id in 212 aa. (225 aa) |
| | BPSS0028 | Hypothetical protein; Low similarity to Streptomyces lincolnensis LmbW protein SWALL:Q54376 (EMBL:X79146) (318 aa) fasta scores: E(): 7.2e-08, 25.91% id in 328 aa. (329 aa) |
| | BPSS0133 | Putative methyltransferase; Similar to Actinomadura hibisca ORF6 SWALL:O32456 (EMBL:D87924) (341 aa) fasta scores: E(): 3e-36, 36.73% id in 343 aa, and to Streptomyces lipmanii O-demethylpuromycin-O-methyltransferase DmpM SWALL:DMPM_STRLP (SWALL:P42712) (376 aa) fasta scores: E(): 7.8e-32, 35.65% id in 331 aa. (341 aa) |
| | BPSS0202 | Hypothetical protein; Very low similarities to parts of Mycobacterium tuberculosis hypothetical 37.9 kDa protein rv1523 or mt1574 or mtcy19g5.05C SWALL:Q50584 (EMBL:Z77826) (347 aa) fasta scores: E(): 9.2e-06, 35.03% id in 137 aa, and to Pseudomonas aeruginosa hypothetical protein pa2650 SWALL:Q9I0I8 (EMBL:AE004694) (269 aa) fasta scores: E(): 5.8e-05, 34.07% id in 135 aa. (297 aa) |
| | BPSS0277 | Similar to Streptomyces sp. JP95 putative methyltransferase GrhL SWALL:Q8KSX2 (EMBL:AF509565) (343 aa) fasta scores: E(): 2e-16, 27.32% id in 333 aa, and to Mycobacterium tuberculosis putative methyltransferase rv0567 or mt0593 or mtv039.05 SWALL:O53764 (EMBL:AL021942) (340 aa) fasta scores: E(): 1.1e-16, 28.03% id in 321 aa. (338 aa) |
| | BPSS0310 | Hypothetical protein; No significant database matches. (172 aa) |
| | rlmJ | Conserved hypothetical protein; Specifically methylates the adenine in position 2030 of 23S rRNA. (281 aa) |
| | BPSS0487 | Hypothetical protein; No significant database matches. (711 aa) |
| | BPSS0714 | Similar to Synechocystis sp. hypothetical protein slr0865 SWALL:P73759 (EMBL:D90909) (337 aa) fasta scores: E(): 2.7e-41, 43.83% id in 308 aa, and to Mycobacterium tuberculosis hypothetical protein rv3701c or mt3804 SWALL:O69669 (EMBL:AL022121) (321 aa) fasta scores: E(): 8.3e-40, 42.4% id in 316 aa. (324 aa) |
| | BPSS0809 | Similar to Ralstonia solanacearum hypothetical protein rsp1510 or rs03031 SWALL:Q8XPX6 (EMBL:AL646085) (132 aa) fasta scores: E(): 7e-36, 71.53% id in 130 aa, and to Streptomyces coelicolor hypothetical protein SCO7305 or SC5F8.15c SWALL:Q9K4K9 (EMBL:AL939131) (117 aa) fasta scores: E(): 2.5e-05, 31.96% id in 122 aa. (129 aa) |
| | BPSS0821 | Hypothetical protein; Poor database matches. C-terminal region is weakly similar to Halobacterium sp. hypothetical protein VNG0713C SWALL:Q9HRG3 (EMBL:AE005016) (231 aa) fasta scores: E(): 0.032, 29.74% id in 232 aa. (306 aa) |
| | BPSS0825 | Hypothetical protein; Poor database matches. C-terminus is similar to the C-terminal region of Rhizobium loti hypothetical protein mlr1181 SWALL:Q98L47 (EMBL:AP002996) (218 aa) fasta scores: E(): 1.8e-12, 34.54% id in 165 aa. Possible alternative translational start site. (235 aa) |
| | BPSS0994 | Hypothetical protein; Similar to Synechocystis sp. hypothetical protein sll1526 SWALL:YF26_SYNY3 (SWALL:P74360) (506 aa) fasta scores: E(): 1.3e-39, 32.11% id in 439 aa, and to Caulobacter crescentus hypothetical protein cc3341 SWALL:Q9A365 (EMBL:AE005995) (528 aa) fasta scores: E(): 3.1e-27, 30.02% id in 473 aa. Possible alternative translational start site. CDS is truncated at the C-terminus in comparison to some similar proteins. (489 aa) |
| | BPSS1034 | Putative membrane protein; Similar to Rhizobium loti hypothetical protein Mll1752 SWALL:Q98JW1 (EMBL:AP002998) (178 aa) fasta scores: E(): 2.7e-22, 42.44% id in 172 aa, and to Rhizobium loti nickel-cobalt-cadmium resistance protein mlr6490 SWALL:Q989C1 (EMBL:AP003009) (176 aa) fasta scores: E(): 3e-06, 30.95% id in 168 aa, and to Sulfolobus tokodaii hypothetical protein St1187 SWALL:Q972E1 (EMBL:AP000985) (199 aa) fasta scores: E(): 7.1e-06, 29.65% id in 145 aa. (246 aa) |
| | BPSS1051 | Hypothetical bacteriophage protein; No significant database matches. (68 aa) |
| | BPSS1077 | Similar to Micrococcus lylae DNA methyltransferase MlyiM SWALL:Q93NZ3 (EMBL:AF355462) (266 aa) fasta scores: E(): 3.1e-08, 25.29% id in 253 aa, and to Xanthomonas campestris site-specific DNA-methyltransferase xcc2967 SWALL:AAM42239 (EMBL:AE012411) (234 aa) fasta scores: E(): 7e-38, 47.21% id in 233 aa, and to Xylella fastidiosa site-specific DNA-methyltransferase xf2313 SWALL:Q9PB32 (EMBL:AE004042) (243 aa) fasta scores: E(): 1.5e-37, 48.48% id in 231 aa; possible alternative start site at codon 50; Belongs to the N(4)/N(6)-methyltransferase family. (291 aa) |
| | BPSS1102 | Conserved hypothetical protein; Similar to Streptococcus agalactiae hypothetical 25.7 kDa protein SWALL:O54084 (EMBL:Y12224) (228 aa) fasta scores: E(): 9.8e-09, 27.12% id in 188 aa, and to Streptomyces galilaeus AknG SWALL:Q9L546 (EMBL:AF257324) (286 aa) fasta scores: E(): 5e-08, 36% id in 150 aa, and to Streptomyces galilaeus AknG SWALL:Q8VWA8 (EMBL:AB008466) (286 aa) fasta scores: E(): 5e-08, 36% id in 150 aa. (269 aa) |
| | BPSS1105 | Putative methyltransferase protein; Similar to Streptomyces avermitilis C5-O-methyltransferase AveD SWALL:Q9S0N6 (EMBL:AB032524) (283 aa) fasta scores: E(): 9.3e-07, 38.28% id in 128 aa, and to Caulobacter crescentus methyltransferase, putative Cc1846 SWALL:Q9A780 (EMBL:AE005858) (243 aa) fasta scores: E(): 3.9e-08, 31.08% id in 222 aa, and to Nocardia aerocolonigenes putative methyltransferase RbmF SWALL:CAC93718 (EMBL:AF534707) (273 aa) fasta scores: E(): 3.3e-07, 39.49% id in 119 aa. (246 aa) |
| | BPSS1106 | Putative thymidylate synthase protein; Similar to Bacteriophage SP01 deoxyuridylate hydroxymethyltransferase 29 SWALL:DUHM_BPSP1 (SWALL:P31654) (383 aa) fasta scores: E(): 6.8e-12, 30.04% id in 223 aa, and to Rhizobium loti thymidylate synthase ThyA or mll1467 SWALL:Q98KH9 (EMBL:AP002997) (264 aa) fasta scores: E(): 8e-08, 24.05% id in 237 aa, and to Agrobacterium tumefaciens thymidylate synthase ThyA or atu2047 or agr_c_3709 SWALL:Q8UDS3 (EMBL:AE009155) (279 aa) fasta scores: E(): 6.8e-07, 23.72% id in 236 aa. (329 aa) |
| | BPSS1126 | Putative O-methyltransferase; Similar to Streptomyces glaucescens tetracenomycin polyketide synthesis 8-O-methyl transferase TcmO SWALL:TCMO_STRGA (SWALL:P39896) (339 aa) fasta scores: E(): 2.8e-13, 26.74% id in 329 aa, and to Streptomyces sp. JP95 putative methyltransferase GrhL SWALL:AAM33664 (EMBL:AF509565) (343 aa) fasta scores: E(): 2.1e-17, 30.14% id in 355 aa, and to Streptomyces argillaceus O-methyltransferase MtmMI SWALL:Q9R6R8 (EMBL:AF077869) (345 aa) fasta scores: E(): 4.8e-15, 30.47% id in 292 aa. (350 aa) |
| | BPSS1245 | Similar to Pseudomonas fluorescens uroporphyrin-III c-methyltransferase CobA SWALL:SUMT_PSEFL (SWALL:P37725) (247 aa) fasta scores: E(): 2.2e-32, 46.38% id in 235 aa, and to Xanthomonas campestris uroporphyrin-III c-methyltransferase CysG or xcc2010 SWALL:AAM41299 (EMBL:AE012305) (258 aa) fasta scores: E(): 1.5e-49, 63.55% id in 236 aa, and to Pseudomonas aeruginosa uroporphyrin-III c-methyltransferase CobA or pa1778 SWALL:Q9I2W4 (EMBL:AE004603) (245 aa) fasta scores: E(): 5e-37, 51.31% id in 228 aa; possible alternative start site at codon 41 and codon 44. (274 aa) |
| | BPSS1296 | Similar to Acinetobacter sp. ADP1 O-methyltransferase-like protein SWALL:Q93D14 (EMBL:AF400582) (222 aa) fasta scores: E(): 7.2e-33, 47.27% id in 220 aa, and to Streptomyces coelicolor putative O-methyltransferase sco2338 or scc53.29 SWALL:Q9KXI2 (EMBL:AL939112) (223 aa) fasta scores: E(): 1.8e-41, 56.5% id in 223 aa, and to Rhizobium loti O-methyltransferase Mlr0279 SWALL:Q98N64 (EMBL:AP002994) (221 aa) fasta scores: E(): 1.2e-39, 53.18% id in 220 aa. (222 aa) |
| | BPSS1333 | Conserved hypothetical protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. (286 aa) |
| | BPSS1484 | Putative membrane protein; Similar to Yersinia pestis hypothetical protein ypo3839 or y0391 SWALL:Q8ZAG3 (EMBL:AJ414159) (405 aa) fasta scores: E(): 1.8e-95, 67.09% id in 392 aa, and to Rhizobium loti hypothetical protein Mll9388 SWALL:Q981G1 (EMBL:AP003016) (408 aa) fasta scores: E(): 5.3e-85, 59.43% id in 392 aa; Belongs to the UPF0261 family. (405 aa) |
| | BPSS1698 | Similar to Rhodobacter sphaeroides modification methylase RsrIM SWALL:MTR1_RHOSH (SWALL:P14751) (319 aa) fasta scores: E(): 4.1e-25, 38.96% id in 231 aa, and to Bacillus subtilis modification methylase BglIIM SWALL:MTB2_BACSU (SWALL:Q45489) (360 aa) fasta scores: E(): 3.3e-22, 35.03% id in 254 aa; Belongs to the N(4)/N(6)-methyltransferase family. (282 aa) |
| | BPSS1750 | Similar to Anabaena sp. hypothetical protein all0385 SWALL:Q8YZS2 (EMBL:AP003582) (210 aa) fasta scores: E(): 7e-37, 51.72% id in 203 aa, and to Synechocystis sp. hypothetical protein slr0065 SWALL:Q55157 (EMBL:D64001) (212 aa) fasta scores: E(): 2.1e-35, 49.75% id in 201 aa. (204 aa) |
| | BPSS1798 | Similar to Agrobacterium tumefaciens hypothetical protein atu5140 or agr_pat_202 SWALL:Q8UKG9 (EMBL:AE008938) (238 aa) fasta scores: E(): 9.5e-47, 60.6% id in 231 aa, and to Pseudomonas aeruginosa hypothetical protein pa2034 SWALL:Q9I281 (EMBL:AE004629) (224 aa) fasta scores: E(): 1.4e-16, 38.24% id in 217 aa. (237 aa) |
| | BPSS1873 | Similar to Ralstonia solanacearum putative methyltransferase protein rsp1647 or rs02206 SWALL:Q8XPJ3 (EMBL:AL646086) (466 aa) fasta scores: E(): 1.3e-45, 37.71% id in 684 aa, and to Myxococcus xanthus protein methyltransferase FrzF SWALL:FRZF_MYXXA (SWALL:P31759) (593 aa) fasta scores: E(): 7.1e-08, 27.28% id in 546 aa. (684 aa) |
| | BPSS2181 | Similar to Caulobacter crescentus hypothetical protein cc2891 SWALL:Q9A4E3 (EMBL:AE005953) (241 aa) fasta scores: E(): 8.7e-45, 48.73% id in 238 aa. (248 aa) |
