STRINGSTRING
BPSL2971 BPSL2971 BPSL0699 BPSL0699 BPSL2970 BPSL2970 rspA rspA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSL2971Similar to Rhizobium meliloti putative 2-dehydro-3-deoxygalactonokinase ra0372 or sma0705 SWALL:Q92ZS7 (EMBL:AE007229) (324 aa) fasta scores: E(): 8.4e-24, 38.22% id in 327 aa, and to Escherichia coli 2-dehydro-3-deoxygalactonokinase DgoK or b3693 SWALL:DGOK_ECOLI (SWALL:P31459) (292 aa) fasta scores: E(): 1.3e-09, 34.16% id in 319 aa. (337 aa)
BPSL0699Similar to Rhizobium meliloti probable galactonate dehydratase protein dgoA or rb0492 or smb20510 SWALL:Q92W53 (EMBL:AL603643) (382 aa) fasta scores: E(): 3.3e-125, 78.27% id in 382 aa, and to Ralstonia solanacearum putative galactonate dehydratase protein dgoAB or rsc2751 or rs00103 SWALL:Q8XVS8 (EMBL:AL646071) (382 aa) fasta scores: E(): 4e-101, 64.92% id in 382 aa. (382 aa)
BPSL2970Putative aldolase; Similar to Rhizobium loti 2-dehydro-3-deoxyphosphogluconate aldolase mlr4743 SWALL:Q98DE1 (EMBL:AP003004) (212 aa) fasta scores: E(): 2e-26, 47.91% id in 192 aa, and to the N-terminal region of Escherichia coli DgoA protein [includes: 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) (6-phospho-2-dehydro-3-deoxygalactonate aldolase) (2-oxo-3-deoxygalactonate 6-phosphate aldolase); galactonate dehydratase (EC 4.2.1.6)] or DgoD or b3692 SWALL:DGOA_ECOLI (SWALL:P31458) (587 aa) fasta scores: E(): 6e-18, 41.62% id in 209 aa. (209 aa)
rspAPutative mandelate racemase/muconate lactonizing enzyme; Similar to Escherichia coli starvation sensing protein RspA or b1581 SWALL:RSPA_ECOLI (SWALL:P38104) (404 aa) fasta scores: E(): 4.3e-108, 65.84% id in 404 aa, and to Caulobacter crescentus mandelate racemase / muconate lactonizing enzyme family cc2812 SWALL:Q9A4L8 (EMBL:AE005947) (403 aa) fasta scores: E(): 3.6e-113, 70.82% id in 401 aa, and to Xanthomonas campestris starvation sensing protein rspa or xcc4104 SWALL:AAM43325 (EMBL:AE012534) (419 aa) fasta scores: E(): 5.4e-109, 69.36% id in 395 aa. (402 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.