STRINGSTRING
pchR pchR BPSS0596 BPSS0596 BPSL1348 BPSL1348 lon lon BPSL1562 BPSL1562 BPSL1588 BPSL1588 BPSL1634 BPSL1634 BPSL1729 BPSL1729 BPSL1794 BPSL1794 BPSL1887 BPSL1887 BPSL2195 BPSL2195 glnG glnG BPSL2391 BPSL2391 BPSL2423 BPSL2423 BPSL2474 BPSL2474 BPSL2475 BPSL2475 lrp lrp BPSL2731 BPSL2731 BPSL2782 BPSL2782 BPSL2819 BPSL2819 fis fis BPSL2908 BPSL2908 BPSL3064 BPSL3064 BPSL3238 BPSL3238 BPSL3279 BPSL3279 BPSL3368 BPSL3368 BPSL3423 BPSL3423 dctD-2 dctD-2 BPSS2250 BPSS2250 BPSS2249 BPSS2249 BPSS2199 BPSS2199 BPSS2132 BPSS2132 BPSS1899 BPSS1899 BPSS1889 BPSS1889 BPSS1866A BPSS1866A BPSS1864 BPSS1864 BPSS1863 BPSS1863 BPSS1824 BPSS1824 BPSS1803 BPSS1803 BPSS1714 BPSS1714 BPSS1710 BPSS1710 BPSS0436 BPSS0436 BPSS0450 BPSS0450 BPSS0505 BPSS0505 BPSS0506 BPSS0506 BPSS0546 BPSS0546 BPSS0549 BPSS0549 BPSS0565 BPSS0565 BPSS1020 BPSS1020 BPSS1134 BPSS1134 BPSS1237 BPSS1237 BPSS1322 BPSS1322 lrp-2 lrp-2 BPSS1371 BPSS1371 BPSS1391 BPSS1391 BPSS1424 BPSS1424 BPSS1520 BPSS1520 bsaN bsaN BPSL0330 BPSL0330 BPSL0245 BPSL0245 BPSL0202 BPSL0202 BPSL0193 BPSL0193 BPSL0128 BPSL0128 BPSL0100 BPSL0100 dnaA dnaA BPSL0060 BPSL0060 BPSL0059 BPSL0059 BPSL0045 BPSL0045 BPSL0340 BPSL0340 BPSL0350 BPSL0350 dctD dctD BPSL0609 BPSL0609 BPSS0435 BPSS0435 BPSS0336 BPSS0336 prpR prpR BPSS0117 BPSS0117 BPSS0073 BPSS0073 BPSS0066 BPSS0066 BPSL0819 BPSL0819 BPSL0849 BPSL0849 BPSL1249 BPSL1249 BPSL1275 BPSL1275 BPSL1311 BPSL1311 BPSS0806 BPSS0806 BPSS0699 BPSS0699 BPSS0681 BPSS0681 FtrA FtrA BPSS0616 BPSS0616 BPSS1564 BPSS1564 BPSS1610 BPSS1610 BPSS0995 BPSS0995 BPSS0912 BPSS0912 BPSS0872 BPSS0872
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
pchRSimilar to Pseudomonas aeruginosa AraC family activator of pyochelin and ferripyochelin receptor synthesis PchR SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) fasta scores: E(): 1.4e-78, 67.34% id in 297 aa. (313 aa)
BPSS0596Similar to Alcaligenes eutrophus acetoin catabolism regulatory protein AcoR SWALL:ACOR_ALCEU (SWALL:P28614) (668 aa) fasta scores: E(): 1.1e-63, 38.95% id in 652 aa, and to Xanthomonas axonopodis transcriptional regulator xac0654 SWALL:AAM35543 (EMBL:AE011694) (661 aa) fasta scores: E(): 2.8e-62, 40.25% id in 641 aa. (646 aa)
BPSL1348Similar to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.4e-35, 36.74% id in 332 aa, and to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 1.1e-25, 31.09% id in 328 aa. (340 aa)
lonATP-dependent protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (805 aa)
BPSL1562Putative transcriptional regulatory protein; C-terminal region similar to Escherichia coli formate hydrogenlyase transcriptional activator FhlA or b2731 SWALL:FHLA_ECOLI (SWALL:P19323) (692 aa) fasta scores: E(): 8e-38, 41.69% id in 331 aa, and to Thiobacillus denitrificans putative transcription regulator SWALL:AAM52226 (EMBL:AY112701) (302 aa) fasta scores: E(): 5e-43, 48% id in 300 aa. Note: N-terminal region (first 100 residues approx.) seems not to have similarities with any database entries. (467 aa)
BPSL1588Putative nonribosomal peptide synthase (fragment); PS00017 ATP/GTP-binding site motif A (P-loop). (153 aa)
BPSL1634Putative two-component regulatory system, sensor kinase protein; Similar to Escherichia coli sensor protein RcsC or b2218 SWALL:RCSC_ECOLI (SWALL:P14376) (949 aa) fasta scores: E(): 7.1e-44, 27.18% id in 986 aa, and to Ralstonia solanacearum probable capsular synthesis regulatory rsp1622 or rs02179 SWALL:Q8XPL6 (EMBL:AL646086) (1098 aa) fasta scores: E(): 2.9e-52, 28.9% id in 993 aa.Note: This CDS appears to have a histidine kinase domain and a response regulator domain also. (1082 aa)
BPSL1729Similar to Rhizobium meliloti putative transcription regulator protein r00348 or smc00429 SWALL:Q92SM3 (EMBL:AL591783) (269 aa) fasta scores: E(): 3.1e-35, 44.52% id in 265 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0686 or rs01763 SWALL:Q8XRZ5 (EMBL:AL646080) (274 aa) fasta scores: E(): 5.5e-35, 47.05% id in 255 aa. (266 aa)
BPSL1794Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4319 or agr_l_1086 SWALL:Q8U7Y0 (EMBL:AE009360) (305 aa) fasta scores: E(): 1e-58, 48.96% id in 290 aa, and to Pseudomonas aeruginosa transcriptional regulator MtlR or pa2337 SWALL:Q9I1E1 (EMBL:AE004660) (301 aa) fasta scores: E(): 1.5e-39, 37.5% id in 280 aa. Note: this CDS is longer in its C-terminal region than most of its database matches. (338 aa)
BPSL1887Putative sigma-54 related transcriptional regulatory protein; Similar to Ralstonia solanacearum probable sigma-54 interacting transcription regulator protein rsp1079 or rs02586 SWALL:Q8XQY9 (EMBL:AL646082) (467 aa) fasta scores: E(): 2.4e-101, 58.35% id in 461 aa, and C-terminal region to the C-terminal region of Pseudomonas aeruginosa type 4 fimbriae expression regulatory protein PilR or pa4547 SWALL:PILR_PSEAE (SWALL:Q00934) (445 aa) fasta scores: E(): 2e-36, 40.05% id in 352 aa. (463 aa)
BPSL2195Putative AraC-family transcriptional regulator; Similar to Ralstonia solanacearum probable transcription regulator protein rsc3062 or rs00506 SWALL:Q8XUX1 (EMBL:AL646073) (268 aa) fasta scores: E(): 5.5e-56, 60.15% id in 251 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3927 SWALL:Q9HX87 (EMBL:AE004810) (262 aa) fasta scores: E(): 4.3e-36, 43.47% id in 230 aa. (287 aa)
glnGNitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (511 aa)
BPSL2391AraC family regulatory protein; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5380 SWALL:Q9HTI4 (EMBL:AE004950) (367 aa) fasta scores: E(): 2.6e-41, 40.06% id in 322 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 2.9e-35, 35.67% id in 328 aa. (348 aa)
BPSL2423Similar to Ralstonia solanacearum probable sigma-54 interacting response regulator transcription regulator protein rsp1667 or rs02226 SWALL:Q8XPH3 (EMBL:AL646086) (491 aa) fasta scores: E(): 1.1e-34, 48.91% id in 460 aa. C-terminus is similar to the C-terminal region of Escherichia coli propionate catabolism operon regulatory protein PrpR SWALL:PRPR_ECOLI (SWALL:P77743) (528 aa) fasta scores: E(): 3.3e-25, 35.19% id in 341 aa. R. solanacearum is extended at the N-terminus in comparison to CDS. (465 aa)
BPSL2474Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG or b4004 SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 1.4e-48, 40% id in 430 aa, and to Ralstonia solanacearum putative sigma-54 interacting transcription regulator protein rsc1186 or rs05718 SWALL:Q8Y058 (EMBL:AL646063) (458 aa) fasta scores: E(): 1.7e-88, 55.75% id in 443 aa. Similar to BPSL2475, 61.674% identity (62.780% ungapped) in 454 aa overlap, and to BPSL0609, 58.652% identity (60.277% ungapped) in 445 aa overlap. (461 aa)
BPSL2475Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG or b4004 SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 2.3e-45, 39.39% id in 429 aa, and to Ralstonia solanacearum putative sigma-54 interacting transcription regulator protein rsc1186 or rs05718 SWALL:Q8Y058 (EMBL:AL646063) (458 aa) fasta scores: E(): 2.3e-84, 53.62% id in 442 aa. Similar to BPSL2474,61.504% identity (62.054% ungapped) in 452 aa overlap, and to BPSL0609, 55.928% identity (57.208% ungapped) in 447 aa overlap. CDS is extended at the N-terminus in comparison to orthologuesand paralogues. (486 aa)
lrpLeucine-responsive regulatory protein; Similar to Escherichia coli, Escherichia coli O157:H7, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 3.9e-31, 55.55% id in 153 aa, and to Ralstonia solanacearum probable leucine-responsive regulatory DNA-binding transcription regulator protein rsc0927 or rs04487 SWALL:Q8Y0W6 (EMBL:AL646061) (165 aa) fasta scores: E(): 1.8e-46, 77.3% id in 163 aa. (162 aa)
BPSL2731Putative AraC-family transcriptional regulatory protein; Similar to many proposed transcriptional regulators including: Ralstonia solanacearum probable transcription regulator protein rsp1157 or rs05428 SWALL:Q8XQR4 (EMBL:AL646083) (324 aa) fasta scores: E(): 8.9e-51, 47.41% id in 310 aa and Pseudomonas aeruginosa probable transcriptional regulator pa3898 SWALL:Q9HXB5 (EMBL:AE004807) (293 aa) fasta scores: E(): 3.4e-49, 47.81% id in 297 aa. (332 aa)
BPSL2782Putative AraC family transcriptional regulator; Similar to Mycobacterium smegmatis AdpA-like protein SWALL:Q9KX52 (EMBL:U20115) (308 aa) fasta scores: E(): 1.3e-11, 31.08% id in 222 aa, and to Caulobacter crescentus transcriptional regulator, AraC family cc3367 SWALL:Q9A339 (EMBL:AE005998) (324 aa) fasta scores: E(): 3.9e-09, 29.81% id in 322 aa, and to Streptomyces coelicolor putative transcriptional regulator sco2329 or scc53.20C SWALL:Q9KXJ1 (EMBL:AL357591) (320 aa) fasta scores: E(): 4.5e-09, 29.44% id in 326 aa. (348 aa)
BPSL2819Similar to Ralstonia solanacearum hypothetical protein rsc2625 or rs00929 SWALL:Q8XW50 (EMBL:AL646071) (233 aa) fasta scores: E(): 2.9e-43, 53.04% id in 230 aa, and to Neisseria meningitidis dnaA-related protein nmb1076 SWALL:Q9JZF5 (EMBL:AE002458) (222 aa) fasta scores: E(): 6.8e-22, 37.22% id in 231 aa, and to Neisseria meningitidis hypothetical protein Nma1279 SWALL:Q9JUJ9 (EMBL:AL162755) (243 aa) fasta scores: E(): 7.3e-22, 37.22% id in 231 aa. (241 aa)
fisDNA-binding protein; Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, Salmonella typhi, and Serratia marcescens DNA-binding protein Fis or b3261 or c4027 or z4621 or ecs4133 or stm3385 or sty3565 SWALL:FIS_ECOLI (SWALL:P11028) (98 aa) fasta scores: E(): 1.5e-09, 40.78% id in 76 aa, and to Ralstonia solanacearum putative fis-like DNA-binding protein rsc0505 or rs05017 SWALL:FISL_RALSO (SWALL:Q8Y231) (77 aa) fasta scores: E(): 1.1e-20, 70.13% id in 77 aa. Note: This CDS is shorter in its N-terminal region than most of its database matche [...] (77 aa)
BPSL2908Similar to Xylella fastidiosa transcriptional regulator xf1254 SWALL:Q9PDX5 (EMBL:AE003959) (280 aa) fasta scores: E(): 1.7e-34, 42.22% id in 270 aa, and to Streptomyces antibioticus putative AraC-like transcription regulator SWALL:ARAL_STRAT (SWALL:Q03320) (303 aa) fasta scores: E(): 1.7e-15, 37.44% id in 219 aa. (300 aa)
BPSL3064Hypothetical protein; Weakly similar to Xanthomonas campestris transcriptional regulator AraC family xcc0235 SWALL:AAM39554 (EMBL:AE012119) (245 aa) fasta scores: E(): 0.013, 26.19% id in 252 aa. Similar to the C-terminal region of Caulobacter crescentus transcriptional regulator, arac family cc3506 SWALL:Q9A2Q0 (EMBL:AE006009) (321 aa) fasta scores: E(): 3.4e-07, 30.26% id in 228 aa. (247 aa)
BPSL3238putativeAsnC-family transcriptional regulator; Similar to Ralstonia solanacearum probable transcription regulator protein Rsc3102 or Rs00555 SWALL:Q8XUT3 (EMBL:AL646073) (162 aa) fasta scores: E(): 6.2e-19, 65.88% id in 170 aa, and to Escherichia coli leucine-responsive regulatory protein Lrp or b0889 or z1234 or ecs0974 SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 2.5e-10, 43.11% id in 167 aa. (171 aa)
BPSL3279Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3965 SWALL:Q9HX51 (EMBL:AE004814) (169 aa) fasta scores: E(): 4.7e-22, 45.16% id in 155 aa, and to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2.3e-19, 40.66% id in 150 aa. (163 aa)
BPSL3368Putative AraC-family transcriptional regulator; Similar to Salmonella typhimurium ethanolamine operon regulatory protein EutR or Stm2454 SWALL:EUTR_SALTY (SWALL:Q9ZFU7) (350 aa) fasta scores: E(): 4.5e-37, 41.08% id in 314 aa. (359 aa)
BPSL3423Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3965 SWALL:Q9HX51 (EMBL:AE004814) (169 aa) fasta scores: E(): 5.8e-18, 41.5% id in 159 aa, and to Klebsiella pneumoniae leucine-responsive regulatory protein Lrp SWALL:LRP_KLEPN (SWALL:P37424) (163 aa) fasta scores: E(): 1.8e-15, 35.57% id in 149 aa. (183 aa)
dctD-2Similar to Rhizobium meliloti C4-dicarboxylate transport transcriptional regulatory protein DctD or rb1525 or smb20613 SWALL:DCTD_RHIME (SWALL:P13632) (460 aa) fasta scores: E(): 7.2e-75, 51.82% id in 438 aa, and to Escherichia coli, and Escherichia coli O157:H7 nitrogen regulation protein Nr GlnG or NtrC or GlnT or b3868 or z5404 or ecs4790 SWALL:NTRC_ECOLI (SWALL:P06713) (469 aa) fasta scores: E(): 9.6e-53, 41.1% id in 472 aa. (448 aa)
BPSS2250Similar to Ralstonia solanacearum probable sigma-54 interacting transcription regulator protein rsp1668 or rs02227 SWALL:Q8XPH2 (EMBL:AL646086) (384 aa) fasta scores: E(): 2.7e-56, 52.59% id in 308 aa, and to Zymomonas mobilis nitrogen assimilation regulatory protein ntrC SWALL:Q9RNP2 (EMBL:AF179611) (372 aa) fasta scores: E(): 8.3e-41, 52.08% id in 240 aa. Note: Also similar to the C-terminal region of BPSS2249 (468 aa) fasta scores: E(): 1e-48, 47.664% identity in 321 aa overlap. (322 aa)
BPSS2249Similar to Ralstonia solanacearum probable sigma-54 interacting response regulator transcription regulator protein rsp1667 or rs02226 SWALL:Q8XPH3 (EMBL:AL646086) (491 aa) fasta scores: E(): 2.6e-102, 62.63% id in 455 aa, and to Escherichia coli acetoacetate metabolism regulatory protein AtoC or Az or b2220 SWALL:ATOC_ECOLI (SWALL:Q06065) (461 aa) fasta scores: E(): 7.5e-55, 39.52% id in 458 aa. Note: Also similar in its C-terminal region to the upstream CDS BPSS2250 (323 aa) fasta scores: E(): 7.7e-44, 47.352% identity in 321 aa overlap. (456 aa)
BPSS2199Putative AsnC-family regulatory protein; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2082 SWALL:Q9I233 (EMBL:AE004636) (158 aa) fasta scores: E(): 3.2e-34, 56.12% id in 155 aa, and to Bacillus subtilis transcriptional regulator AzlB SWALL:AZLB_BACSU (SWALL:O07920) (157 aa) fasta scores: E(): 2.2e-15, 34.45% id in 148 aa. Note: Also similar to BPSL0849 (168 aa) fasta scores: E(): 3.2e-29, 52.500% identity in 160 aa overlap. (158 aa)
BPSS2132Putative sigma-54 dependent transcriptional regulator; Similar to Burkholderia sp. RP007 transcriptional regulator PhnR SWALL:Q9ZHH9 (EMBL:AF061751) (562 aa) fasta scores: E(): 5e-35, 40.37% id in 374 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2005 SWALL:Q9I2A4 (EMBL:AE004627) (481 aa) fasta scores: E(): 2.6e-81, 58.6% id in 488 aa, and to Bacillus halodurans transcriptional regulator bh3899 SWALL:Q9K633 (EMBL:AP001520) (559 aa) fasta scores: E(): 1.7e-41, 35.3% id in 473 aa. (506 aa)
BPSS1899Putative AraC-family regulatory protein; Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 2.5e-27, 33.23% id in 346 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.7e-20, 29.88% id in 338 aa. (350 aa)
BPSS1889Putative AraC-family transcriptional regulator; Similar to Ralstonia solanacearum probable transcription regulator protein rsc1832 or rs04267 SWALL:Q8XYC6 (EMBL:AL646067) (342 aa) fasta scores: E(): 1.7e-19, 33.62% id in 348 aa, and to Pseudomonas putida xylDLEGF operon transcriptional activator 1 XylS1 SWALL:XYS1_PSEPU (SWALL:Q04710) (321 aa) fasta scores: E(): 2.4e-14, 30.53% id in 298 aa. Possible alternative translational start sites. (346 aa)
BPSS1866AHypothetical protein; Possible gene remnant. Similar to the c-terminal regions of Rhizobium meliloti putative transcription factor SMA1454 SWALL:Q92YS0 (EMBL:AE007266) (356 aa) fasta scores: E(): 1.5, 30.4% id in 125 aa, and Pseudomonas putida transcriptional regulator, AraC family SWALL:Q88EF7 (EMBL:AE016790) (353 aa) fasta scores: E(): 0.49, 34.23% id in 111 aa. (137 aa)
BPSS1864Putative AraC-family regulatory protein; Similar to Streptomyces coelicolor putative transcriptional regulator sco6746 or sc5f2a.29 SWALL:Q9X7Q2 (EMBL:AL939129) (325 aa) fasta scores: E(): 2.3e-50, 50.94% id in 318 aa, and to Caulobacter crescentus transcriptional regulator, AraC family cc2960 SWALL:Q9A483 (EMBL:AE005960) (312 aa) fasta scores: E(): 5.1e-46, 47.92% id in 313 aa. Note: This CDS is longer in its N-terminal region than most of its database matches. (346 aa)
BPSS1863Similar to Anabaena sp. thij family protein all7521 SWALL:Q8ZSI9 (EMBL:AP003602) (226 aa) fasta scores: E(): 2.7e-43, 53.36% id in 208 aa, and to Streptomyces coelicolor hypothetical protein sco6747 sco6747 or sc5f2a.30 SWALL:Q9X7Q3 (EMBL:AL939129) (211 aa) fasta scores: E(): 7e-30, 43.81% id in 210 aa. (232 aa)
BPSS1824Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3220 SWALL:Q9HZ20 (EMBL:AE004745) (254 aa) fasta scores: E(): 3.8e-21, 37.4% id in 254 aa, and to Photobacterium leiognathi probable transcriptional regulator LumQ SWALL:LUMQ_PHOLE (SWALL:Q51872) (248 aa) fasta scores: E(): 9.7e-13, 24.59% id in 248 aa. (255 aa)
BPSS1803Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2489 SWALL:Q9I0Z3 (EMBL:AE004676) (271 aa) fasta scores: E(): 2.3e-43, 44.01% id in 259 aa, and to Streptomyces coelicolor putative AraC-family regulatory protein sco2294 or scc30.02C SWALL:Q9L019 (EMBL:AL939112) (278 aa) fasta scores: E(): 1.6e-23, 32.95% id in 267 aa. (284 aa)
BPSS1714Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4297 or agr_l_1135 SWALL:Q8U802 (EMBL:AE009358) (313 aa) fasta scores: E(): 4.8e-31, 39.72% id in 287 aa, and to Vibrio cholerae transcriptional regulator, AraC/XylS family vc1260 SWALL:Q9KSJ6 (EMBL:AE004205) (299 aa) fasta scores: E(): 3.8e-21, 30.36% id in 303 aa. (324 aa)
BPSS1710Similar to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2.5e-45, 76.73% id in 159 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Shigella flexneri, and Enterobacter aerogenes leucine-responsive regulatory protein SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 8.8e-22, 41.44% id in 152 aa. (175 aa)
BPSS0436Putative AraC-family regulatory protein; Similar to Rhizobium leguminosarum putative arac-like transcriptional regulator SWALL:Q93EA6 (EMBL:AF361470) (303 aa) fasta scores: E(): 1.6e-38, 38.92% id in 298 aa, and to Rhizobium leguminosarum putative arac-like transcriptional regulator SWALL:Q93EA7 (EMBL:AF361470) (306 aa) fasta scores: E(): 3.7e-14, 26.88% id in 305 aa. (300 aa)
BPSS0450DJ-1/PfpI family protein; Similar to Methanosarcina mazei transcriptional regulator, AraC family mm3310 SWALL:AAM33006 (EMBL:AE013592) (209 aa) fasta scores: E(): 6.8e-05, 26.92% id in 208 aa, and to parts of Xanthomonas campestris thiJ/pfpI family protein xcc3565 SWALL:AAM42835 (EMBL:AE012477) (257 aa) fasta scores: E(): 5.9e-07, 29.37% id in 177 aa. (205 aa)
BPSS0505AraC family regulatory protein; Similar to Streptomyces coelicolor putative transcriptional regulator SCO6746 or SC5f2A.29 SWALL:Q9X7Q2 (EMBL:AL939129) (325 aa) fasta scores: E(): 5.5e-47, 45.62% id in 320 aa, and to Caulobacter crescentus AraC family transcriptional regulator cc2960 SWALL:Q9A483 (EMBL:AE005960) (312 aa) fasta scores: E(): 8.8e-44, 43.5% id in 308 aa. Similar to BPSS1864, 56.782% identity (56.782% ungapped) in 317 aa overlap. (321 aa)
BPSS0506Similar to Anabaena sp. ThiJ family protein all7521 SWALL:Q8ZSI9 (EMBL:AP003602) (226 aa) fasta scores: E(): 2.7e-23, 39.6% id in 202 aa, and to Streptomyces coelicolor hypothetical protein sco6747 sco6747 or sc5f2a.30 SWALL:Q9X7Q3 (EMBL:AL939129) (211 aa) fasta scores: E(): 2.2e-14, 31.03% id in 203 aa. (232 aa)
BPSS0546AraC family regulatory protein; Similar to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 5.7e-114, 85.71% id in 336 aa, and to Ralstonia solanacearum probable transcriptional regulator transcription regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 1.5e-65, 55.12% id in 312 aa. Similar to BPSS1424, 56.913% identity (57.097% ungapped) in 311 aa overlap. (341 aa)
BPSS0549Similar to Ralstonia solanacearum hypothetical protein rsp0057 or rs02032 SWALL:Q8XTP9 (EMBL:AL646076) (177 aa) fasta scores: E(): 8.8e-72, 90.85% id in 175 aa, and to Pseudomonas aeruginosa hypothetical protein pa5397 SWALL:Q9HTG7 (EMBL:AE004952) (176 aa) fasta scores: E(): 1e-39, 57.71% id in 175 aa. (177 aa)
BPSS0565AraC family regulatory protein; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5389 SWALL:Q9HTH5 (EMBL:AE004951) (336 aa) fasta scores: E(): 5.2e-77, 62.58% id in 310 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5380 SWALL:Q9HTI4 (EMBL:AE004950) (367 aa) fasta scores: E(): 1.5e-48, 43.73% id in 311 aa. (314 aa)
BPSS1020Putative AraC family transcriptional regulator; Similar to Bacillus sp. GL1 protein Orf1 SWALL:Q9RC93 (EMBL:AB019619) (297 aa) fasta scores: E(): 8.1e-06, 27.88% id in 269 aa, to codon 279 and to Streptococcus pyogenes putative two-component response regulator Spy1556 SWALL:Q99YT2 (EMBL:AE006588) (246 aa) fasta scores: E(): 4.3e-07, 40.2% id in 97 aa, from codon 209 to codon 301 and to Citrobacter freundii arabinose operon regulatory protein araC SWALL:ARAC_CITFR (SWALL:P11765) (281 aa) fasta scores: E(): 6.3e-07, 38.23% id in 102 aa from codon 194 to codon 296. (348 aa)
BPSS1134PadR-like family regulatory protein; Similar to Streptomyces coelicolor hypothetical protein sco7067 or sc4g1.33 SWALL:Q9FC17 (EMBL:AL939130) (183 aa) fasta scores: E(): 3.5e-36, 60.23% id in 171 aa, and to Ralstonia solanacearum hypothetical protein rsp0309 or rs05461 SWALL:Q8XT08 (EMBL:AL646077) (178 aa) fasta scores: E(): 1.6e-31, 57.23% id in 159 aa, and to Anabaena sp. hypothetical protein All4972 SWALL:Q8YMG2 (EMBL:AP003598) (179 aa) fasta scores: E(): 7.1e-18, 35.75% id in 179 aa. (185 aa)
BPSS1237Putative AraC family transcriptional activator protein; Similar to Pseudomonas fluorescens activator protein mtlR SWALL:O52770 (EMBL:AF047527) (301 aa) fasta scores: E(): 1.2e-38, 39.33% id in 300 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu4319 or agr_l_1086 SWALL:Q8U7Y0 (EMBL:AE009360) (305 aa) fasta scores: E(): 3.9e-51, 46.29% id in 283 aa. (332 aa)
BPSS1322Putative AraC family transcriptional regulatory protein; Similar to Lactococcus lactis xylose regulatory protein XylR SWALL:Q9X421 (EMBL:AF092042) (319 aa) fasta scores: E(): 3.4e-05, 20.28% id in 281 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa3269 SWALL:Q9HYX2 (EMBL:AE004749) (284 aa) fasta scores: E(): 7e-24, 33.81% id in 275 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu1081 or agr_c_1998 SWALL:Q8UGF7 (EMBL:AE009072) (285 aa) fasta scores: E(): 3e-23, 33.08% id in 272 aa. (290 aa)
lrp-2Similar to Klebsiella pneumoniae leucine-responsive regulatory protein Lrp SWALL:LRP_KLEPN (SWALL:P37424) (163 aa) fasta scores: E(): 3.1e-24, 45.09% id in 153 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0645 or rs05577 SWALL:Q8XS36 (EMBL:AL646080) (186 aa) fasta scores: E(): 1.7e-48, 75.88% id in 170 aa, and to Rhizobium leguminosarum leucine-responsive regulatory-like protein SWALL:AAO17689 (EMBL:AY172673) (158 aa) fasta scores: E(): 4.9e-27, 50% id in 150 aa. (169 aa)
BPSS1371Putative AraC family transcriptional regulator; Similar to Streptomyces griseus transcriptional regulator AdpA SWALL:Q9S166 (EMBL:AB023785) (405 aa) fasta scores: E(): 3.6e-18, 30.97% id in 339 aa, and to Ralstonia solanacearum probable transcriptional regulatory DNA-binding transcription regulator protein rsc1098 or rs04066 SWALL:Q8Y0E6 (EMBL:AL646062) (360 aa) fasta scores: E(): 8.7e-115, 84.4% id in 359 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0044 or rs02019 SWALL:Q8XTR2 (EMBL:AL646076) (387 aa) fasta scores: E(): 1.2e-111, 82.81% id in 355 aa. [...] (388 aa)
BPSS1391Putative AraC family regulator of pathogenicity genes; Similar to Ralstonia solanacearum regulatory protein HrpB or rsp0873 or rs01644 SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 5.6e-49, 34.35% id in 492 aa. Almost identical to the previously sequenced Burkholderia pseudomallei hypothetical 54.7 kDa protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 4.9e-195, 99.58% id in 483 aa. (483 aa)
BPSS1424Putative AraC transcriptional regulatory protein; Similar to Pseudomonas syringae arginine pathway regulatory protein ArgR SWALL:Q8VVB2 (EMBL:AF443787) (354 aa) fasta scores: E(): 4.9e-35, 40% id in 315 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0068 or rs02043 SWALL:Q8XTN8 (EMBL:AL646076) (334 aa) fasta scores: E(): 2.1e-97, 76.2% id in 332 aa, and to Ralstonia solanacearum probable transcriptional regulator protein rsp0054 or rs02029 SWALL:Q8XTQ2 (EMBL:AL646076) (343 aa) fasta scores: E(): 2.4e-67, 56.82% id in 315 aa. (332 aa)
BPSS1520Weakly similar to Streptomyces coelicolor putative regulatory protein sco5017 or sck15.19 SWALL:Q9KY85 (EMBL:AL939122) (365 aa) fasta scores: E(): 4e-11, 28.89% id in 353 aa, and Pseudomonas aeruginosa probable transcriptional regulator pa4094 SWALL:Q9HWT4 (EMBL:AE004825) (319 aa) fasta scores: E(): 2e-09, 26.93% id in 323 aa. (353 aa)
bsaNPutative AraC-family regulator of type III secretion system; Similar to Salmonella typhimurium, and Salmonella typhi invasion protein InvF or stm2899 or sty3022 SWALL:INVF_SALTY (SWALL:P39437) (216 aa) fasta scores: E(): 3.5e-18, 36.01% id in 211 aa, and to Escherichia coli O157:H7 putative regulatory protein for type III secretion apparatus z4198 or ecs3734 SWALL:Q8X6D3 (EMBL:AE005515) (249 aa) fasta scores: E(): 4.4e-15, 36.84% id in 190 aa. (213 aa)
BPSL0330AsnC family regulatory protein; Similar to Bacillus subtilis transcriptional regulator LrpC SWALL:LRPC_BACSU (SWALL:P96582) (144 aa) fasta scores: E(): 1.1e-09, 29.32% id in 133 aa, and to Rhizobium loti transcriptional regulator mll3910 SWALL:Q98F66 (EMBL:AP003003) (152 aa) fasta scores: E(): 3.1e-32, 63.63% id in 143 aa. CDS is extended at the N-terminus in comparison to orthologues. (162 aa)
BPSL0245Putative ATPase; No significant database matches. (335 aa)
BPSL0202Two-component regulatory system family, response regulator protein. Similar to Rhodovulum sulfidophilum photosynthetic apparature regulatory protein RegA SWALL:REGA_RHOSU (SWALL:O82868) (183 aa) fasta scores: E(): 4.4e-24, 46.32% id in 177 aa, and to Pseudomonas aeruginosa probable two-component response regulator pa4493 SWALL:Q9HVS8 (EMBL:AE004863) (186 aa) fasta scores: E(): 7.5e-29, 52.27% id in 176 aa. (183 aa)
BPSL0193AraC family transcription regulatory protein; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1380 SWALL:Q9I3W4 (EMBL:AE004567) (321 aa) fasta scores: E(): 2.2e-59, 56.08% id in 296 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2276 SWALL:Q9I1J8 (EMBL:AE004653) (296 aa) fasta scores: E(): 9.1e-50, 49.11% id in 283 aa. (314 aa)
BPSL0128Two-component regulatory system family, response regulator protein. Similar to Bradyrhizobium japonicum transcriptional regulatory protein FixJ SWALL:FIXJ_BRAJA (SWALL:P23221) (205 aa) fasta scores: E(): 1.1e-09, 31.15% id in 199 aa, and to Ralstonia solanacearum probable two component response regulator transcription regulator protein rsc0078 or rs02276 SWALL:Q8Y3A2 (EMBL:AL646057) (239 aa) fasta scores: E(): 5.9e-33, 72.19% id in 241 aa. (227 aa)
BPSL0100O6-methylguanine-DNA methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Belongs to the MGMT family. (364 aa)
dnaAChromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (533 aa)
BPSL0060Similar to Streptomyces coelicolor putative transcriptional regulator sco6746 or SC5f2A.29 SWALL:Q9X7Q2 (EMBL:AL049587) (325 aa) fasta scores: E(): 1.5e-15, 31.15% id in 337 aa, and to Xanthomonas axonopodis pv. citri str. 306 transcriptional regulator AraC family AdpA SWALL:AAM38899 (EMBL:AE012054) (336 aa) fasta scores: E(): 2.8e-14, 29.73% id in 333 aa. (364 aa)
BPSL0059Hypothetical protein; Poor database matches. Weakly similar to Sulfolobus solfataricus ring oxydation complex/ phenylacetic acid degradation related protein SSO2022 SWALL:Q97WU2 (EMBL:AE006809) (266 aa) fasta scores: E(): 0.0008, 23% id in 226 aa. (278 aa)
BPSL0045AraC family regulatory protein; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa4070 SWALL:Q9HWV8 (EMBL:AE004823) (316 aa) fasta scores: E(): 1.1e-17, 30.39% id in 306 aa. C-terminus is similar to the C-terminal region of Escherichia coli transcriptional activator FeaR or MaoR or MaoB SWALL:FEAR_ECOLI (SWALL:Q47129) (301 aa) fasta scores: E(): 9.5e-14, 30.61% id in 245 aa. (319 aa)
BPSL0340AsnC family regulatory protein; Similar to Escherichia coli, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp or AlsB or LivR or Ihb or OppI SWALL:LRP_ENTAE (SWALL:P19494) (163 aa) fasta scores: E(): 1.5e-21, 44% id in 150 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1377 or rs02081 SWALL:Q8XQA9 (EMBL:AL646084) (152 aa) fasta scores: E(): 2.2e-48, 80.92% id in 152 aa. (152 aa)
BPSL0350Fis family regulatory protein; Similar to the C-terminal regions of Brucella melitensis nitrogen assimilation regulatory protein bmei0868 SWALL:Q8YHD3 (EMBL:AE009527) (453 aa) fasta scores: E(): 1.6e-11, 33.88% id in 183 aa, and to Salmonella typhimurium putative transcriptional regulator of two-component regulator protein YfhA SWALL:Q8ZN32 (EMBL:AE008816) (445 aa) fasta scores: E(): 1.3e-10, 34.83% id in 178 aa. (218 aa)
dctDSimilar to Rhizobium meliloti C4-dicarboxylate transport transcriptional regulatory protein DctD SWALL:DCTD_RHIME (SWALL:P13632) (460 aa) fasta scores: E(): 7.2e-76, 49.23% id in 455 aa, and to Ralstonia solanacearum probable C4-dicarboxylate transport response regulator transcription regulator protein rsc0332 or rs03299 SWALL:Q8Y2K3 (EMBL:AL646058) (438 aa) fasta scores: E(): 4.8e-109, 69.81% id in 444 aa. Similar to BPSS0063, 52.715% identity (54.312% ungapped) in 442 aa overlap. (451 aa)
BPSL0609Fis family regulatory protein; Similar to Escherichia coli transcriptional regulatory protein ZraR or HydG SWALL:ZRAR_ECOLI (SWALL:P14375) (441 aa) fasta scores: E(): 9.5e-49, 39.66% id in 416 aa, and to Ralstonia solanacearum putative sigma-54 interacting transcription regulator protein rsc1186 or rs05718 SWALL:Q8Y058 (EMBL:AL646063) (458 aa) fasta scores: E(): 2.2e-77, 50.83% id in 421 aa. Similar to BPSL2474, 58.652% identity (60.277% ungapped) in 445 aa overlap, and to BPSL2475, 55.928% identity (57.208% ungapped) in 447 aa overlap. Possible alternative translational start site. (462 aa)
BPSS0435Putative AraC-family transcriptional regulator; C-terminus is similar to the C-terminal regions of Rhizobium loti probable transcriptional regulator mll0489 SWALL:Q98MP6 (EMBL:AP002995) (313 aa) fasta scores: E(): 5.7e-24, 36.29% id in 259 aa, and Pseudomonas aeruginosa probable transcriptional regulator pa2696 SWALL:Q9I0E6 (EMBL:AE004697) (297 aa) fasta scores: E(): 5.5e-20, 34.07% id in 226 aa. (308 aa)
BPSS0336Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1261 SWALL:Q9I483 (EMBL:AE004555) (224 aa) fasta scores: E(): 6.8e-51, 58.48% id in 224 aa, and to Xanthomonas axonopodis transcriptional regulator xac2551 SWALL:Q8PJI0 (EMBL:AE011895) (226 aa) fasta scores: E(): 1.5e-38, 45.53% id in 224 aa. (238 aa)
prpRPutative sigma interaction-related Fis-family transcriptional regulator; Similar to Burkholderia sacchari PrpR SWALL:Q8VPT1 (EMBL:AY033092) (646 aa) fasta scores: E(): 3.9e-121, 60.78% id in 663 aa, and to Escherichia coli propionate catabolism operon regulatory protein PrpR or b0330 SWALL:PRPR_ECOLI (SWALL:P77743) (528 aa) fasta scores: E(): 3e-41, 36.99% id in 673 aa. CDS is extended at the C-terminus in comparison to orthologues. (694 aa)
BPSS0117Putative histidine kinase/response regulator fusion protein; Similar to Ralstonia solanacearum probable capsular synthesis regulatory RcsC or rsp1622 or rs02179 SWALL:Q8XPL6 (EMBL:AL646086) (1098 aa) fasta scores: E(): 1.2e-48, 27.88% id in 1126 aa, and C-terminal region to Escherichia coli sensor protein EvgS precursor or b2370 SWALL:EVGS_ECOLI (SWALL:P30855) (1197 aa) fasta scores: E(): 2.1e-40, 32.07% id in 555 aa. (1014 aa)
BPSS0073Conserved hypothetical protein (fragment); Partial CDS. Similar to the C-terminal region of Ralstonia solanacearum hypothetical protein rsc3358 or rs02633 SWALL:Q8XU36 (EMBL:AL646074) (179 aa) fasta scores: E(): 0.00013, 46.51% id in 43 aa, and of Neurospora crassa histone H3 methyltransferase Dim-5 SWALL:Q8X225 (EMBL:AF419248) (318 aa) fasta scores: E(): 0.49, 37.5% id in 48 aa. (339 aa)
BPSS0066AraC family regulatory protein; Similar to the C-terminal region of Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 2.1e-10, 35.13% id in 148 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 4.4e-10, 36.55% id in 145 aa. Possible gene remnant. (168 aa)
BPSL0819AraC family transcriptional regulator; Similar to Streptomyces griseus A-factor-responsive transcriptional activator AdpA SWALL:Q9S166 (EMBL:AB023785) (405 aa) fasta scores: E(): 2.1e-30, 36.33% id in 322 aa, and to Streptomyces coelicolor putative transcriptional regulator sco6746 or sc5f2a.29 SWALL:Q9X7Q2 (EMBL:AL049587) (325 aa) fasta scores: E(): 2.9e-43, 41.94% id in 329 aa; Alternative start site at codon 33; upstream repeat region (ggcgc)3. (344 aa)
BPSL0849AsnC family transcriptional regulator; Similar to Rhizobium meliloti leucine-responsive regulatory protein Lrp or r01568 or smc01223 SWALL:LRP_RHIME (SWALL:P56901) (156 aa) fasta scores: E(): 5.9e-19, 41.78% id in 146 aa, and to Ralstonia solanacearum probable transcription regulator protein rsc0761 or rs05092 SWALL:Q8Y1C9 (EMBL:AL646060) (176 aa) fasta scores: E(): 4.1e-37, 65.1% id in 149 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2082 SWALL:Q9I233 (EMBL:AE004636) (158 aa) fasta scores: E(): 1.7e-32, 62.06% id in 145 aa. (167 aa)
BPSL1249Putative AraC-family transcriptional regulator; Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 7.8e-32, 33.53% id in 331 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.4e-28, 32.22% id in 332 aa. (347 aa)
BPSL1275Putative AsnC-family transcriptional regulator; Similar to Zymomonas mobilis glutamate uptake regulatory protein Grp SWALL:GRP_ZYMMO (SWALL:P74996) (164 aa) fasta scores: E(): 4.3e-25, 46.3% id in 149 aa, to Caulobacter crescentus transcriptional regulator, AsnC family cc0424 SWALL:Q9AB10 (EMBL:AE005714) (164 aa) fasta scores: E(): 2.1e-35, 63.75% id in 149 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical transcriptional regulator YbaO or b0447 or z0555 or ecs0501 SWALL:YBAO_ECOLI (SWALL:P54986) (152 aa) fasta scores: E(): 3.7e-32, 56.66% id in 150 aa. (155 aa)
BPSL1311Putative AsnC-family regulatory protein; Similar to Pseudomonas putida bkd operon transcriptional regulator BkdR SWALL:BKDR_PSEPU (SWALL:P42179) (161 aa) fasta scores: E(): 2e-12, 30.92% id in 152 aa, to Ralstonia solanacearum probable transcription regulator protein rsc2801 or rs00304 SWALL:Q8XVM9 (EMBL:AL646071) (158 aa) fasta scores: E(): 1.6e-18, 39.61% id in 154 aa, and to Rhizobium loti putative transcription regulator protein msi248 SWALL:CAD31280 (EMBL:AL672114) (151 aa) fasta scores: E(): 9e-17, 42.46% id in 146 aa. (164 aa)
BPSS0806Putative leucine-responsive regulatory protein; Similar to Escherichia coli, Shigella flexneri, and Enterobacter aerogenes leucine-responsive regulatory protein Lrp SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 2.2e-18, 42.56% id in 148 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1377 or rs02081 SWALL:Q8XQA9 (EMBL:AL646084) (152 aa) fasta scores: E(): 6.2e-19, 42% id in 150 aa. (155 aa)
BPSS0699AraC family regulatory protein; Similar to Xanthomonas axonopodis transcriptional regulator xac1442 SWALL:AAM36313 (EMBL:AE011776) (271 aa) fasta scores: E(): 2e-34, 42.08% id in 259 aa, and to Xanthomonas campestris transcriptional regulator xcc1396 SWALL:AAM40694 (EMBL:AE012239) (287 aa) fasta scores: E(): 9.1e-34, 40.97% id in 266 aa. (280 aa)
BPSS0681AraC family regulatory protein; Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2047 SWALL:Q9I268 (EMBL:AE004631) (329 aa) fasta scores: E(): 1.8e-49, 47.72% id in 329 aa, and weakly similar to Pseudomonas aeruginosa regulatory protein AraC family activator of pyochelin and ferripyochelin receptor synthesis PchR SWALL:PCHR_PSEAE (SWALL:P40883) (296 aa) fasta scores: E(): 7.7e-06, 24.25% id in 301 aa. (327 aa)
FtrAAraC family regulatory protein; Similar to Rhizobium loti transcriptional regulator mll3844 SWALL:Q98FC1 (EMBL:AP003002) (332 aa) fasta scores: E(): 4.9e-64, 55.91% id in 313 aa, and to Caulobacter crescentus AraC family transcriptional regulator CC3367 SWALL:Q9A339 (EMBL:AE005998) (324 aa) fasta scores: E(): 3.5e-63, 55.76% id in 312 aa. (318 aa)
BPSS0616AraC family regulatory protein; Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 5.3e-14, 25% id in 332 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp0653 or rs05569 SWALL:Q8XS28 (EMBL:AL646080) (387 aa) fasta scores: E(): 5.1e-89, 64.85% id in 350 aa. Possible alternative translational start site. (375 aa)
BPSS1564Similar to Pseudomonas putida lrp-family transcriptional regulators MdeR SWALL:O33467 (EMBL:D89015) (159 aa) fasta scores: E(): 2.2e-26, 49.33% id in 150 aa, and to Pseudomonas putida transcriptional regulator, AsnC-family pp1307 SWALL:AAN66931 (EMBL:AE016778) (159 aa) fasta scores: E(): 1.4e-25, 48.66% id in 150 aa. (154 aa)
BPSS1610AraC-family transcriptional regulator; Similar to Ralstonia solanacearum regulatory protein HrpB or rsp0873 or rs01644 SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 1e-53, 37.65% id in 486 aa, and to Burkholderia pseudomallei hypothetical 54.7 kDa protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 2.9e-59, 41.17% id in 493 aa. (481 aa)
BPSS0995Similar to Ralstonia solanacearum regulatory protein HrpB SWALL:HRPB_RALSO (SWALL:P31778) (477 aa) fasta scores: E(): 4.3e-42, 31.48% id in 486 aa, and to Burkholderia pseudomallei hypothetical protein SWALL:Q93L01 (EMBL:AF074878) (483 aa) fasta scores: E(): 5.7e-61, 39.47% id in 494 aa. CDS is extended at the C-terminus in comparison to orthologues. (519 aa)
BPSS0912AsnC family regulatory protein; Similar to Salmonella typhimurium, and Klebsiella aerogenes leucine-responsive regulatory protein Lrp SWALL:LRP_SALTY (SWALL:P37403) (163 aa) fasta scores: E(): 4.8e-17, 37.83% id in 148 aa, and to Pseudomonas putida Lrp-family transcriptional regulators MdeR SWALL:O33467 (EMBL:D89015) (159 aa) fasta scores: E(): 5.2e-28, 46.45% id in 155 aa. (160 aa)
BPSS0872AraC family regulatory protein; Similar to Escherichia coli ethanolamine operon regulatory protein EutR SWALL:EUTR_ECOLI (SWALL:P36547) (350 aa) fasta scores: E(): 3.5e-29, 33.83% id in 334 aa, and to Salmonella typhimurium ethanolamine operon regulatory protein stm2454 SWALL:EUTR_SALTY (SWALL:Q9ZFU7) (350 aa) fasta scores: E(): 1.6e-27, 32.91% id in 322 aa. (339 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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