STRINGSTRING
BPSS1236 BPSS1236 BPSS0345 BPSS0345 BPSL2608 BPSL2608 BPSL0833 BPSL0833 BPSL1300 BPSL1300 potG potG BPSS0702 BPSS0702 potG-2 potG-2 BPSS1738 BPSS1738 BPSL1652 BPSL1652 modE modE cysA cysA BPSS2085 BPSS2085 mopII mopII ugpC ugpC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSS1236Putative sugar transporter ATP-binding protein; Similar to Bacillus pseudofirmus maltose transportor ATP-binding protein malK SWALL:O87551 (EMBL:AF084104) (366 aa) fasta scores: E(): 1.3e-51, 50.14% id in 355 aa, and to Rhizobium loti sugar ABC transporter, ATP-binding protein mlr4917 SWALL:Q98D09 (EMBL:AP003005) (363 aa) fasta scores: E(): 1.2e-60, 58.21% id in 347 aa, and to Brucella melitensis maltose/maltodextrin transport ATP-binding protein malK bmeI1713 SWALL:Q8YF14 (EMBL:AE009605) (363 aa) fasta scores: E(): 2.3e-55, 53.46% id in 361 aa. (397 aa)
BPSS0345Similar to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein AfuC or atu4786 or agr_l_193 SWALL:Q8U6M1 (EMBL:AE009407) (353 aa) fasta scores: E(): 7e-41, 40.4% id in 349 aa, and to Brucella melitensis iron(III)-transport ATP-binding protein bmeii0567 SWALL:Q8YCG3 (EMBL:AE009693) (353 aa) fasta scores: E(): 2.6e-40, 44.59% id in 305 aa. (365 aa)
BPSL2608Similar to Rhizobium loti ATP-binding component of ABC sugar transporter mlr3054 SWALL:Q98H30 (EMBL:AP003001) (371 aa) fasta scores: E(): 4.4e-70, 55.49% id in 373 aa and to Rhizobium loti ABC transporter, ATP-binding component mlr6654 SWALL:Q988P3 (EMBL:AP003009) (366 aa) fasta scores: E(): 2.8e-69, 56.95% id in 374 aa. See BPSL261 as a possible indictation as to the substrate of this transport system. (372 aa)
BPSL0833Putative sugar ABC transporter protein; Similar to Salmonella typhimurium maltose/maltodextrin transport ATP-binding protein MalK or stm4230 SWALL:MALK_SALTY (SWALL:P19566) (369 aa) fasta scores: E(): 2.6e-62, 54.14% id in 362 aa, and to Ralstonia solanacearum probable sugar ATP-binding ABC transporter protein rsc2140 or rs01463 SWALL:Q8XXH4 (EMBL:AL646068) (369 aa) fasta scores: E(): 1.1e-101, 83.51% id in 370 aa, and to Vibrio cholerae maltose/maltodextrin ABC transporter, ATP-binding protein vca0946 SWALL:Q9KL04 (EMBL:AE004421) (373 aa) fasta scores: E(): 1.2e-64, 56.35% id in 362 a [...] (388 aa)
BPSL1300Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1794 or rs04193 SWALL:Q8XYG4 (EMBL:AL646066) (359 aa) fasta scores: E(): 1.5e-68, 64.36% id in 348 aa, and to Escherichia coli putative ferric transport ATP-binding protein AfuC or b0262 SWALL:AFUC_ECOLI (SWALL:P37009) (348 aa) fasta scores: E(): 1.9e-36, 40.76% id in 341 aa. (342 aa)
potGPutrescine transport ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (378 aa)
BPSS0702Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc2939 or rs00150 SWALL:Q8XV92 (EMBL:AL646072) (358 aa) fasta scores: E(): 9.6e-77, 63.86% id in 357 aa, and to Yersinia pestis probable ABC-transporter, ATP-binding protein ypo3048 SWALL:Q8ZCE3 (EMBL:AJ414155) (356 aa) fasta scores: E(): 1.7e-75, 62.64% id in 356 aa. (355 aa)
potG-2Putrescine ABC transport system, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (384 aa)
BPSS1738Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1734 or rs02922 SWALL:Q8XYM4 (EMBL:AL646066) (363 aa) fasta scores: E(): 1.8e-102, 80.82% id in 365 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa0603 SWALL:Q9I5T5 (EMBL:AE004496) (369 aa) fasta scores: E(): 2e-69, 59.94% id in 362 aa. (366 aa)
BPSL1652Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 7.7e-42, 41.14% id in 350 aa, and to Rhizobium meliloti putative ABC-transporter ATP-binding protein ra0436 or sma0803 SWALL:Q92ZL9 (EMBL:AE007234) (359 aa) fasta scores: E(): 1.6e-71, 60.27% id in 360 aa. (363 aa)
modESimilar to Azotobacter vinelandii molybdenum transport protein ModE or ModA SWALL:MODE_AZOVI (SWALL:P37733) (270 aa) fasta scores: E(): 2.2e-34, 50.6% id in 249 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri transcriptional regulator ModE or ModR or b0761 or z0931 or ecs0789 or sf0543 SWALL:MODE_ECOLI (SWALL:P46930) (262 aa) fasta scores: E(): 2.2e-23, 40.16% id in 244 aa. (262 aa)
cysASulfate transport ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (351 aa)
BPSS2085Putative ABC transport system, ATP-binding protein; No significant database matches to the full length CDS. C-terminal region is similar to Escherichia coli maltose/maltodextrin transport ATP-binding protein MalK SWALL:MALK_ECOLI (SWALL:P02914) (371 aa) fasta scores: E(): 3.4e-59, 50.8% id in 374 aa, and to Vibrio cholerae maltose/maltodextrin ABC transporter, ATP-binding protein vca0946 SWALL:Q9KL04 (EMBL:AE004421) (373 aa) fasta scores: E(): 1.6e-62, 51.75% id in 371 aa. CDS is extended at the C-terminus in comparison to orthologues. Similar to BPSL0833, 51.482% identity (52.909% ung [...] (414 aa)
mopIISimilar to Clostridium pasteurianum molybdenum-pterin binding protein II MopII SWALL:MOP2_CLOPA (SWALL:P08854) (68 aa) fasta scores: E(): 2.8e-05, 47.82% id in 69 aa, and to Ralstonia solanacearum putative molybdopterin-binding protein rsc1342 or rs02864 SWALL:Q8XZQ3 (EMBL:AL646064) (71 aa) fasta scores: E(): 6.9e-19, 80.28% id in 71 aa. (71 aa)
ugpCPutative ABC transporter ATP-binding subunit; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (360 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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