STRINGSTRING
msdA msdA mmsA mmsA BPSS0743 BPSS0743
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
msdASimilar to Streptomyces coelicolor methylmalonic acid semialdehyde dehydrogenase MsdA SWALL:Q53935 (EMBL:L48550) (500 aa) fasta scores: E(): 5.7e-112, 60.28% id in 491 aa. (508 aa)
mmsASimilar to Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] MmsA SWALL:MMSA_PSEAE (SWALL:P28810) (496 aa) fasta scores: E(): 6.6e-114, 58.46% id in 496 aa, and to Ralstonia solanacearum probable methylmalonate-semialdehyde dehydrogenase oxidoreductase protein rsp0650 or rs05572 SWALL:Q8XS31 (EMBL:AL646080) (515 aa) fasta scores: E(): 3.2e-161, 80.86% id in 507 aa. (509 aa)
BPSS0743Similar to Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] MmsA SWALL:MMSA_PSEAE (SWALL:P28810) (496 aa) fasta scores: E(): 2.9e-89, 47.56% id in 492 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa0130 SWALL:Q9I702 (EMBL:AE004451) (497 aa) fasta scores: E(): 3.6e-129, 66.53% id in 493 aa. Similar to BPSL3420, 57.730% identity (58.300% ungapped) in 511 aa overlap. (505 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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