STRINGSTRING
BPSS0035 BPSS0035 BPSS0065 BPSS0065 BPSS0158 BPSS0158 BPSS0186 BPSS0186 BPSS0776 BPSS0776 BPSS2074 BPSS2074
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSS0035Similar to Zymomonas mobilis gluconolactonase precursor Gnl SWALL:GNL_ZYMMO (SWALL:Q01578) (320 aa) fasta scores: E(): 1.4e-14, 33.45% id in 278 aa, and to Ralstonia solanacearum putative gluconolactonase precursor rsp0824 or rs05371 SWALL:Q8XRK7 (EMBL:AL646081) (353 aa) fasta scores: E(): 2.8e-69, 59.2% id in 326 aa. (316 aa)
BPSS0065Putative exported protein; Weak similarity to the C-terminal region of Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 3.5e-14, 30.93% id in 682 aa. (650 aa)
BPSS0158Putative exported protein; Very low similarity to Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 1.3e-16, 30.72% id in 677 aa, and in its C-terminal region to Anabaena sp. hypothetical protein all3696 SWALL:Q8YQW5 (EMBL:AP003594) (379 aa) fasta scores: E(): 2.1e-06, 27.71% id in 368 aa. (638 aa)
BPSS0186Putative exported protein; Similar to Anabaena sp. hypothetical protein all2038 SWALL:Q8YVE0 (EMBL:AP003588) (743 aa) fasta scores: E(): 2.9e-14, 28.5% id in 684 aa, and in its C-terminal region to Anabaena sp. hypothetical protein all3696 SWALL:Q8YQW5 (EMBL:AP003594) (379 aa) fasta scores: E(): 3.3e-05, 28.8% id in 368 aa. (638 aa)
BPSS0776Putative sugar transport system permease protein (fragment); 2 probable transmembrane helices predicted for BPSS0775 by TMHMM2.0 at aa 7-29 and 39-61. (311 aa)
BPSS2074Similar to Oryctolagus cuniculus senescence marker protein-30 RGM or SMP30 SWALL:SM30_RABIT (SWALL:Q9TTJ6) (299 aa) fasta scores: E(): 2.7e-21, 29.73% id in 296 aa, and to Rhizobium loti regucalcin homolog mlr7379 SWALL:Q986F6 (EMBL:AP003011) (301 aa) fasta scores: E(): 1.7e-37, 40.83% id in 289 aa. (296 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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