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BPSL0326 BPSL0326 BPSL1029 BPSL1029 BPSL1304A BPSL1304A BPSL1397 BPSL1397 BPSL1655 BPSL1655 BPSL1674 BPSL1674 BPSL1728 BPSL1728 BPSL2559 BPSL2559 BPSL3036 BPSL3036 BPSS0146 BPSS0146 BPSS0252 BPSS0252 BPSS0265 BPSS0265 BPSS0562 BPSS0562 BPSS0701 BPSS0701 BPSS0708 BPSS0708 BPSS0747 BPSS0747 BPSS0757 BPSS0757 BPSS0783 BPSS0783 BPSS0873 BPSS0873 BPSS0879 BPSS0879 BPSS0893 BPSS0893 BPSS0943 BPSS0943 BPSS0979 BPSS0979 BPSS1679 BPSS1679 BPSS2064 BPSS2064 BPSS2160 BPSS2160 BPSS2202 BPSS2202 BPSS2289 BPSS2289 BPSS2306 BPSS2306 BPSL0041 BPSL0041 BPSL0044 BPSL0044 BPSL0289 BPSL0289
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSL0326Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.1e-10, 31.45% id in 391 aa, and to Ralstonia solanacearum probable porin precursor transmembrane protein rsp0337 or rs00714 SWALL:Q8XSY0 (EMBL:AL646078) (351 aa) fasta scores: E(): 1.6e-71, 55.84% id in 351 aa. (358 aa)
BPSL1029Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.9e-11, 29.97% id in 387 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc2136 or rs01467 SWALL:Q8XXH8 (EMBL:AL646068) (352 aa) fasta scores: E(): 3.6e-43, 41.22% id in 376 aa. (366 aa)
BPSL1304APutative exported protein; No significant database matches to the full length CDS. N-terminus is similar to the N-terminal regions of Burkholderia cepacia outer membrane protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 0.0057, 44.59% id in 74 aa, and Ralstonia solanacearum probable porin transmembrane protein RS04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 0.024, 42.85% id in 63 aa. (145 aa)
BPSL1397Similar to Ralstonia solanacearum putative porin signal peptide protein rsc2760 or rs00094 SWALL:Q8XVR9 (EMBL:AL646071) (353 aa) fasta scores: E(): 2e-21, 31.74% id in 356 aa, and to Neisseria gonorrhoeae major outer membrane protein P.IA precursor PorA SWALL:OMA_NEIGO (SWALL:P05430) (326 aa) fasta scores: E(): 4.8e-08, 27.58% id in 319 aa. (355 aa)
BPSL1655Putative outer membrane porin protein; Similar to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 6.4e-45, 42.89% id in 387 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.4e-17, 31.11% id in 376 aa. Note: Also similar to BPSL3036 (387 aa) fasta scores: E(): 1.4e-51, 45.503% identity in 378 aa overlap. (372 aa)
BPSL1674Putative tranposase (fragment); Similar to the N-terminal regions of Bacteriophage phiE125 TnpB SWALL:Q8W6R2 (EMBL:AF447491) (284 aa) fasta scores: E(): 1.9e-30, 88.76% id in 89 aa, and Xanthomonas axonopodis transposase xac2432 SWALL:AAM37283 (EMBL:AE011880) (301 aa) fasta scores: E(): 3.4e-15, 56.18% id in 89 aa. (366 aa)
BPSL1728Putative exported porin; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.1e-21, 30.44% id in 404 aa, and to Comamonas acidovorans outer membrane porin protein 32 precursor Omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 2.1e-09, 28.32% id in 399 aa. (407 aa)
BPSL2559Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.5e-21, 34.94% id in 415 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 7e-58, 45.54% id in 393 aa. (379 aa)
BPSL3036Outer membrane porin; Similar to Burkholderia cepacia Opcp1 porin SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 1.2e-35, 45.89% id in 390 aa, and to Comamonas acidovorans outer membrane porin protein 32 precursor Omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 1.4e-16, 32.26% id in 406 aa. (386 aa)
BPSS0146Hypothetical protein; Similar to the C-terminal region of Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.3e-23, 38.64% id in 207 aa, and of Acinetobacter lwoffii hypothetical 36.5 kDa protein SWALL:Q934S0 (EMBL:U77658) (344 aa) fasta scores: E(): 1e-06, 26.22% id in 225 aa. (209 aa)
BPSS0252Similar to Ralstonia solanacearum probable porin transmembrane protein rsc1082 or rs04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 3.1e-44, 43.06% id in 404 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.1e-20, 34.18% id in 392 aa. (399 aa)
BPSS0265Putative porin-related protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.1e-21, 33.58% id in 405 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 1.6e-34, 39.75% id in 405 aa. (382 aa)
BPSS0562Putative porin protein; Similar to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 1e-29, 38.07% id in 394 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 1.1e-32, 39.34% id in 399 aa. (380 aa)
BPSS0701Similar to Comamonas acidovorans outer membrane porin protein 32 precursor Omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 1.7e-21, 32.97% id in 373 aa, and to Ralstonia solanacearum putative transmembrane outer membrane porin signal peptide protein rsc1737 or rs02925 SWALL:Q8XYM1 (EMBL:AL646066) (353 aa) fasta scores: E(): 8e-92, 67.42% id in 350 aa. (363 aa)
BPSS0708Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 9.1e-19, 30% id in 380 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 2.9e-36, 37.28% id in 413 aa. (400 aa)
BPSS0747Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.6e-13, 32.18% id in 407 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 5.5e-40, 42.22% id in 386 aa. (365 aa)
BPSS0757Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.2e-17, 32.2% id in 413 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 3.1e-51, 47.38% id in 401 aa. Similar to BPSL2559, 54.271% identity (59.178% ungapped) in 398 aa overlap, and to BPSS0943, 50.382% identity (55.000% ungapped) in 393 aa overlap. (384 aa)
BPSS0783Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 7.5e-13, 32.93% id in 413 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp1594 or rs02151 SWALL:Q8XPP4 (EMBL:AL646085) (374 aa) fasta scores: E(): 8.3e-78, 57.75% id in 374 aa. (379 aa)
BPSS0873Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 6.8e-16, 30.84% id in 389 aa, and to Alcaligenes eutrophus hypothetical protein SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 4.9e-35, 37.06% id in 402 aa. (400 aa)
BPSS0879Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1e-14, 31.85% id in 405 aa, and to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 3.5e-69, 76.45% id in 378 aa. (374 aa)
BPSS0893Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.5e-13, 33.16% id in 401 aa, and to Ralstonia solanacearum probable porin transmembrane protein rsc1082 or rs04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 1e-29, 36.95% id in 368 aa. (362 aa)
BPSS0943Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.8e-19, 34.21% id in 377 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 2.1e-87, 60.1% id in 386 aa. Similar to BPSL2559, 53.197% identity (55.914% ungapped) in 391 aa overlap, and to BPSL3036, 50.370% identity (55.890% ungapped) in 405 aa overlap, and to BPSS0757, 50.382% identity (55.000% ungapped) in 393 aa overlap. (384 aa)
BPSS0979Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2.5e-11, 30.13% id in 365 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc2136 or rs01467 SWALL:Q8XXH8 (EMBL:AL646068) (352 aa) fasta scores: E(): 4.2e-38, 40.27% id in 370 aa. (371 aa)
BPSS1679Putative porin related exported protein; Similar to Ralstonia solanacearum probable porin signal peptide protein rsp0051 or rs02026 SWALL:Q8XTQ5 (EMBL:AL646076) (382 aa) fasta scores: E(): 6.7e-44, 44.33% id in 406 aa, and to Alcaligenes eutrophus hypothetical 40.6 kDa protein in gbd 3'region precursor SWALL:Q44021 (EMBL:L36817) (390 aa) fasta scores: E(): 1.4e-36, 42.71% id in 391 aa. (384 aa)
BPSS2064Putative porin protein; Similar to Comamonas acidovorans outer membrane porin protein 32 precursor omp32 SWALL:OM32_COMAC (SWALL:P24305) (351 aa) fasta scores: E(): 6.7e-16, 28.64% id in 370 aa, and to Ralstonia solanacearum putative porin signal peptide protein rsc2760 or rs00094 SWALL:Q8XVR9 (EMBL:AL646071) (353 aa) fasta scores: E(): 5.9e-46, 42.12% id in 349 aa. Similar to BPSL1029, 65.565% identity (66.854% ungapped) in 363 aa overlap. (359 aa)
BPSS2160Putative outer membrane porin protein; Similar to Burkholderia cepacia major porin protein Opcp1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 3.7e-15, 31.59% id in 383 aa, and to Ralstonia solanacearum putative outer membrane porin signal peptide protein rsc2855 or rs00250 SWALL:Q8XVH6 (EMBL:AL646072) (389 aa) fasta scores: E(): 7.3e-30, 34.77% id in 394 aa, and to Ralstonia solanacearum putative porin signal peptide protein rsc2933 or rs00157 SWALL:Q8XV98 (EMBL:AL646072) (379 aa) fasta scores: E(): 4.4e-21, 32.46% id in 345 aa. (359 aa)
BPSS2202Putative porin related, membrane protein; Similar to Ralstonia solanacearum probable porin signal peptide protein rsc2108 or rs01496 SWALL:Q8XXK5 (EMBL:AL646068) (381 aa) fasta scores: E(): 2.3e-16, 31.94% id in 385 aa, and to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 8.5e-11, 30.78% id in 393 aa. (357 aa)
BPSS2289Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 2e-06, 27.79% id in 421 aa, and to Ralstonia solanacearum probable porin transmembrane protein rsc1084 or rs04103 SWALL:Q8Y0G0 (EMBL:AL646062) (364 aa) fasta scores: E(): 1.9e-17, 31.41% id in 382 aa. (375 aa)
BPSS2306Putative porin protein; Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 1.9e-19, 35.01% id in 377 aa, and to Ralstonia solanacearum probable porin transmembrane protein rsc1082 or rs04105 SWALL:Q8Y0G2 (EMBL:AL646062) (394 aa) fasta scores: E(): 1.4e-45, 43.18% id in 389 aa. Similar to BPSS1679, 57.069% identity (58.421% ungapped) in 389 aa overlap, and to BPSS0252, 51.451% identity (54.167% ungapped) in 379 aa overlap. (390 aa)
BPSL0041Similar to Bordetella pertussis outer membrane porin protein precursor SWALL:OMP_BORPE (SWALL:Q04064) (385 aa) fasta scores: E(): 3.8e-13, 28.26% id in 414 aa, and to Ralstonia solanacearum probable porin signal peptide protein rsc3390 or rs05671 SWALL:Q8XU04 (EMBL:AL646075) (376 aa) fasta scores: E(): 6.2e-77, 54.33% id in 381 aa. (375 aa)
BPSL0044Putative outer membrane porin protein; Similar to Burkholderia cepacia major porin protein OpcP1 SWALL:Q45106 (EMBL:D63823) (361 aa) fasta scores: E(): 1.4e-22, 38.08% id in 386 aa, and to Ralstonia solanacearum probable porin precursor transmembrane protein rsp0337 or rs00714 SWALL:Q8XSY0 (EMBL:AL646078) (351 aa) fasta scores: E(): 1.2e-18, 34.13% id in 331 aa. (366 aa)
BPSL0289Conserved hypothetical protein (pseudogene); Similar to Pseudomonas putida glyoxalase family protein SWALL:Q88H56 (EMBL:AE016787) (125 aa) fasta scores: E(): 5.4e-11, 41.52% id in 118 aa, and to Pseudomonas syringae pv. tomato str. DC3000 hypothetical protein SWALL:Q887D4 (EMBL:AE016860) (131 aa) fasta scores: E(): 1.5e-11, 42.99% id in 107 aa. CDS contains a nonsense mutation (amber) after codon 26, and frameshifts after codons 18, 67 and 91. (377 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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