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BPSS1118 BPSS1118 czcB czcB bpeA bpeA BPSL1568 BPSL1568 BPSS1930 BPSS1930 BPSL1268 BPSL1268 BPSL1665 BPSL1665 amrA amrA sucB sucB BPSL1975 BPSL1975 BPSL2020 BPSL2020 BPSL2234 BPSL2234 BPSS0197 BPSS0197 BPSS0292 BPSS0292 BPSS0625 BPSS0625 BPSS1937 BPSS1937
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSS1118Putative HlyD family protein; Similar to Pseudomonas aeruginosa probable RND efflux membrane fusion protein precursor pa4206 SWALL:Q9HWH5 (EMBL:AE004837) (370 aa) fasta scores: E(): 9.3e-39, 39.07% id in 366 aa, and to Vibrio cholerae hypothetical protein Vc0165 SWALL:Q9KVI1 (EMBL:AE004106) (368 aa) fasta scores: E(): 3.1e-34, 35.21% id in 355 aa, and to Rhizobium loti RND efflux membrane fusion protein precursor mlr3647 SWALL:Q98FR7 (EMBL:AP003002) (465 aa) fasta scores: E(): 2.4e-29, 32.15% id in 367 aa. (365 aa)
czcBSimilar to Alcaligenes eutrophus cobalt-zinc-cadmium resistance protein CzcB SWALL:CZCB_ALCEU (SWALL:P13510) (520 aa) fasta scores: E(): 3.3e-73, 53.04% id in 443 aa, and to Alcaligenes sp. cation efflux system protein CzcB SWALL:CZCB_ALCSP (SWALL:P94176) (520 aa) fasta scores: E(): 1e-72, 52.59% id in 443 aa, and to Pseudomonas aeruginosa RND divalent metal cation efflux membrane fusion protein czcb precursor czcb or pa2521 SWALL:Q9I0W1 (EMBL:AE004679) (484 aa) fasta scores: E(): 1.1e-62, 45.3% id in 490 aa, and to Ralstonia solanacearum probable cobalt-zinc-cadmium resistance CzcB or [...] (489 aa)
bpeASimilar to Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor acrA or MtcA or Lir SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 5.5e-60, 53.76% id in 385 aa, and to Ralstonia solanacearum probable acriflavin resistance lipoprotein A precursor rsc0011 or rs01833 SWALL:Q8Y3G9 (EMBL:AL646057) (398 aa) fasta scores: E(): 6.6e-61, 55.22% id in 402 aa; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (420 aa)
BPSL1568Putative lipoprotein; Similar to Rhizobium loti component of multidrug efflux system mlr7297 SWALL:Q986M0 (EMBL:AP003011) (380 aa) fasta scores: E(): 2.8e-29, 35.97% id in 353 aa, and to Rhizobium loti rnd efflux membrane fusion protein mll5519 SWALL:Q98BL6 (EMBL:AP003006) (356 aa) fasta scores: E(): 1.4e-28, 35.53% id in 363 aa; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (371 aa)
BPSS1930Similar to Chlorobium tepidum ABC-type export system, membrane fusion protein ct0553 SWALL:AAM71795 (EMBL:AE012830) (314 aa) fasta scores: E(): 1.8e-24, 46.92% id in 358 aa, and to Escherichia coli hypothetical membrane protein YbhG or b0795 SWALL:YBHG_ECOLI (SWALL:P75777) (332 aa) fasta scores: E(): 1.9e-07, 30.1% id in 299 aa. (361 aa)
BPSL1268Similar to Ralstonia solanacearum putative resistance transmembrane protein rsp1197 or rs03141 SWALL:Q8XQM5 (EMBL:AL646083) (449 aa) fasta scores: E(): 4.6e-70, 53.22% id in 434 aa, and to Escherichia coli hypothetical protein YegM precursor or b2074 SWALL:YEGM_ECOLI (SWALL:P76397) (415 aa) fasta scores: E(): 1.3e-55, 44.96% id in 407 aa; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (445 aa)
BPSL1665Similar to Rhizobium meliloti putative toxin secretion transmembrane protein r02036 or smc04208 SWALL:Q92NX2 (EMBL:AL591789) (436 aa) fasta scores: E(): 1.6e-27, 33.25% id in 439 aa, and to Vibrio cholerae secretion protein, HlyD family vca1080 SWALL:Q9KKM3 (EMBL:AE004433) (481 aa) fasta scores: E(): 6.4e-27, 34.25% id in 435 aa. (471 aa)
amrAAlmost identical to Burkholderia pseudomallei putative membrane fusion protein AmrA SWALL:O87935 (EMBL:AF072887) (399 aa) fasta scores: E(): 7.7e-133, 99.74% id in 399 aa. Similar to Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor AcrA or MtcA or Lir or b0463 or z0578 or ecs0516 SWALL:ACRA_ECO57 (SWALL:P31223) (397 aa) fasta scores: E(): 3.5e-43, 40.1% id in 384 aa; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (399 aa)
sucBDihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (425 aa)
BPSL1975Putative antibiotic resistance protein; Full length similar to Pseudomonas aeruginosa hypothetical protein pa3892 SWALL:Q9HXC1 (EMBL:AE004806) (302 aa) fasta scores: E(): 3.2e-74, 67.59% id in 287 aa, and to Escherichia coli multidrug resistance protein K EmrK or b2368 SWALL:EMRK_ECOLI (SWALL:P52599) (387 aa) fasta scores: E(): 4.6e-09, 28.35% id in 335 aa, and C-terminal region to Burkholderia cepacia fusaric acid resistance protein FusE SWALL:FUSE_BURCE (SWALL:P24130) (168 aa) fasta scores: E(): 7.1e-46, 81.65% id in 169 aa; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (297 aa)
BPSL2020HlyD family secretion protein; Similar to Escherichia coli multidrug resistance protein K EmrK or b2368 SWALL:EMRK_ECOLI (SWALL:P52599) (387 aa) fasta scores: E(): 1.7e-18, 31.65% id in 357 aa, and to Rhizobium meliloti hypothetical protein rb1406 or smb20699 SWALL:Q92TT9 (EMBL:AL603647) (365 aa) fasta scores: E(): 5.4e-33, 38.71% id in 372 aa, and to Pseudomonas putida TrpB trpB SWALL:Q8RPR5 (EMBL:AF360362) (353 aa) fasta scores: E(): 3.2e-32, 38.75% id in 338 aa. Note: This CDS is longer in its N-terminal region than most of its database matches. (395 aa)
BPSL2234Putative exported protein; Similar to Escherichia coli hypothetical protein precursor YegM or b2074 SWALL:YEGM_ECOLI (SWALL:P76397) (415 aa) fasta scores: E(): 2.5e-37, 36.29% id in 405 aa, and to Rhizobium loti RND efflux membrane fusion protein mll5780 SWALL:Q98B05 (EMBL:AP003007) (417 aa) fasta scores: E(): 1.5e-35, 34.54% id in 414 aa. (426 aa)
BPSS0197Putative biotin-binding protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (88 aa)
BPSS0292Putative multidrug efflux system exported protein; Similar to Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein A precursor AcrA or MtcA or Lir or b0463 or z0578 or ecs0516 SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 5.3e-33, 32.98% id in 385 aa, and to Ralstonia solanacearum probable transmembrane multidrug efflux system transmembrane protein ys02620 or rsp1112 or rs02620 SWALL:Q8XQV6 (EMBL:AL646082) (438 aa) fasta scores: E(): 6.1e-78, 57.77% id in 405 aa; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (409 aa)
BPSS0625Putative drug-efflux protein; Similar to Escherichia coli macrolide-specific efflux protein MacA SWALL:MACA_ECOLI (SWALL:P75830) (371 aa) fasta scores: E(): 3e-34, 43.33% id in 390 aa, and to Pseudomonas syringae putative periplasmic protein SWALL:Q93NK1 (EMBL:AF372703) (389 aa) fasta scores: E(): 9.4e-54, 52.04% id in 367 aa; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (400 aa)
BPSS1937Putative ABC transport system, exported protein; Similar to Pseudomonas aeruginosa hypothetical protein pa5232 SWALL:Q9HTV8 (EMBL:AE004935) (357 aa) fasta scores: E(): 4.4e-67, 60.51% id in 352 aa, and to Escherichia coli hypothetical protein precursor YhiI or b3487 SWALL:YHII_ECOLI (SWALL:P37626) (355 aa) fasta scores: E(): 1.3e-63, 58.4% id in 351 aa. (357 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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