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BPSL0051 BPSL0051 BPSL0390 BPSL0390 BPSL1183 BPSL1183 BPSL2738 BPSL2738 hmgA hmgA feaB feaB BPSS0911 BPSS0911 BPSS2307 BPSS2307
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BPSL0051Similar to Escherichia coli phenylacetaldehyde dehydrogenase FeaB or PadA or MaoB SWALL:FEAB_ECOLI (SWALL:P80668) (499 aa) fasta scores: E(): 2.5e-88, 49.79% id in 498 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa4073 SWALL:Q9HWV5 (EMBL:AE004823) (495 aa) fasta scores: E(): 1.1e-114, 62.29% id in 488 aa. Similar to BPSS0868, 59.714% identity (60.707% ungapped) in 489 aa overlap. Similar to BPSS0868, 59.714% identity (60.707% ungapped) in 489 aa overlap. (501 aa)
BPSL0390Fumarylacetoacetate (FAA) hydrolase family protein; Similar to Ralstonia solanacearum hypothetical protein rsc0301 or rs03268 SWALL:Q8Y2N4 (EMBL:AL646058) (330 aa) fasta scores: E(): 5.7e-101, 76.22% id in 328 aa, and to Xanthomonas campestris putative dioxygenase xcc0591 SWALL:AAM39907 (EMBL:AF204145) (329 aa) fasta scores: E(): 6e-75, 60.99% id in 323 aa. (330 aa)
BPSL1183Putative glutamyl-tRNA amidotransferase; Similar to Pseudomonas aeruginosa probable amidase pa0704 SWALL:Q9I5M2 (EMBL:AE004506) (464 aa) fasta scores: E(): 3.4e-115, 64.79% id in 463 aa, and to Agrobacterium tumefaciens glutamyl-tRNA amidotransferase subunit A atu4441 or agr_l_854 SWALL:Q8U7K8 (EMBL:AE009373) (465 aa) fasta scores: E(): 4.1e-103, 58.96% id in 463 aa. Note: It has a possible alternative start codon located in the intergenic region, 75 bp upstream. (464 aa)
BPSL2738Putative hydrolase; Similar to Prokaryotic and Eukaryotic hydrolases including: Ralstonia solanacearum probable fumarylacetoacetase rsp0690 or rs01759 SWALL:Q8XRZ1 (EMBL:AL646080) (423 aa) fasta scores: E(): 7.1e-116, 69.23% id in 416 aa and to Homo sapiens fumarylacetoacetase Fah SWALL:FAAA_HUMAN (SWALL:P16930) (419 aa) fasta scores: E(): 2.1e-99, 57.17% id in 411 aa. (435 aa)
hmgAHomogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. (450 aa)
feaBSimilar to Escherichia coli phenylacetaldehyde dehydrogenase FeaB or PadA or MaoB SWALL:FEAB_ECOLI (SWALL:P80668) (499 aa) fasta scores: E(): 7.1e-100, 54.36% id in 493 aa, and to Pseudomonas aeruginosa probable aldehyde dehydrogenase pa4073 SWALL:Q9HWV5 (EMBL:AE004823) (495 aa) fasta scores: E(): 2.2e-114, 60.8% id in 495 aa. Similar to BPSL0051, 59.259% identity (59.504% ungapped) in 486 aa overlap. (500 aa)
BPSS0911Putative amidase; Similar to Bacillus subtilis glutamyl-tRNA(Gln) amidotransferase subunit A GatA SWALL:GATA_BACSU (SWALL:O06491) (485 aa) fasta scores: E(): 7.3e-30, 34.67% id in 496 aa, and to Pseudomonas aeruginosa probable amidase pa4342 SWALL:Q9HW59 (EMBL:AE004850) (494 aa) fasta scores: E(): 6.5e-115, 60.78% id in 482 aa; Belongs to the amidase family. (497 aa)
BPSS2307Putative amidase; C-terminal region is similar to Bacillus subtilis glutamyl-tRNA(Gln) amidotransferase subunit A GatA SWALL:GATA_BACSU (SWALL:O06491) (485 aa) fasta scores: E(): 1.8e-29, 32.27% id in 471 aa, and Xanthomonas axonopodis Glu-tRNAGln amidotransferase A subunit xac1002 SWALL:AAM35885 (EMBL:AE011729) (509 aa) fasta scores: E(): 1.4e-81, 54.41% id in 476 aa. CDS is extended at the N-terminus in comparison to orthologues. Possible alternative translational start site. (528 aa)
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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