STRINGSTRING
rl31 rl31 rs16 rs16 rl19 rl19 rl28 rl28 rs1 rs1 rl13 rl13 rs9 rs9 rl33 rl33 rl7 rl7 rl10 rl10 rl1 rl1 rl11 rl11 rs21 rs21 rl27 rl27 rl21 rl21 rs10 rs10 rs7 rs7 rs12 rs12 rl17 rl17 rs11 rs11 rs13 rs13 rl15 rl15 rs5 rs5 rl18 rl18 rl6 rl6 rs8 rs8 rl5 rl5 rl24 rl24 rl14 rl14 rs17 rs17 rl29 rl29 rl16 rl16 rs3 rs3 rl22 rl22 rs19 rs19 rl2 rl2 rl23 rl23 rl4 rl4 rl3 rl3 rs20 rs20 rs4 rs4 rs2 rs2 rl34 rl34 rl36 rl36 rs14 rs14 ctc ctc rs6 rs6 rs18 rs18 rl9 rl9 rl32 rl32 rl35 rl35 rl20 rl20 rs15 rs15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rl31L31 Ribosomal Protein. (108 aa)
rs16S16 Ribosomal Protein; Belongs to the bacterial ribosomal protein bS16 family. (116 aa)
rl19L19 Ribosomal Protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (121 aa)
rl28L28 Ribosomal Protein; Belongs to the bacterial ribosomal protein bL28 family. (89 aa)
rs1S1 Ribosomal Protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (By similarity). (569 aa)
rl13L13 Ribosomal Protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (150 aa)
rs9S9 Ribosomal Protein; Belongs to the universal ribosomal protein uS9 family. (129 aa)
rl33L33 Ribosomal Protein; Belongs to the bacterial ribosomal protein bL33 family. (52 aa)
rl7L7/L12 Ribosomal Protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (130 aa)
rl10L10 Ribosomal Protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (172 aa)
rl1L1 Ribosomal Protein; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (232 aa)
rl11L11 Ribosomal Protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa)
rs21S21 Ribosomal Protein; Belongs to the bacterial ribosomal protein bS21 family. (58 aa)
rl27L27 Ribosomal Protein; Belongs to the bacterial ribosomal protein bL27 family. (83 aa)
rl21L21 Ribosomal Protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (107 aa)
rs10S10 Ribosomal Protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (105 aa)
rs7S7 Ribosomal Protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (157 aa)
rs12S12 Ribosomal Protein; With S4 and S5 plays an important role in translational accuracy. (129 aa)
rl17L17 Ribosomal Protein. (141 aa)
rs11S11 Ribosomal Protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (132 aa)
rs13S13 Ribosomal Protein; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (122 aa)
rl15L15 Ribosomal Protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa)
rs5S5 Ribosomal Protein; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (165 aa)
rl18L18 Ribosomal Protein; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (123 aa)
rl6L6 Ribosomal Protein; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (183 aa)
rs8S8 Ribosomal Protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (133 aa)
rl5L5 Ribosomal Protein; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (180 aa)
rl24L24 Ribosomal Protein; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (111 aa)
rl14L14 Ribosomal Protein; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rs17S17 Ribosomal Protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (83 aa)
rl29L29 Ribosomal Protein; Belongs to the universal ribosomal protein uL29 family. (72 aa)
rl16L16 Ribosomal Protein; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (138 aa)
rs3S3 Ribosomal Protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (224 aa)
rl22L22 Ribosomal Protein; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (111 aa)
rs19S19 Ribosomal Protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (88 aa)
rl2L2 Ribosomal Protein; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (284 aa)
rl23L23 Ribosomal Protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (111 aa)
rl4L4 Ribosomal Protein; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (222 aa)
rl3L3 Ribosomal Protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (221 aa)
rs20S20 Ribosomal Protein; Binds directly to 16S ribosomal RNA. (98 aa)
rs4S4 Ribosomal Protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (209 aa)
rs2S2 Ribosomal Protein; Belongs to the universal ribosomal protein uS2 family. (282 aa)
rl34L34 Ribosomal Protein; Belongs to the bacterial ribosomal protein bL34 family. (45 aa)
rl36L36 Ribosomal Protein; Belongs to the bacterial ribosomal protein bL36 family. (45 aa)
rs14S14 Ribosomal Protein; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
ctcGeneral Stress Protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (185 aa)
rs6S6 Ribosomal Protein; Binds together with S18 to 16S ribosomal RNA. (112 aa)
rs18S18 Ribosomal Protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (81 aa)
rl9L9 Ribosomal Protein; Binds to the 23S rRNA. (167 aa)
rl32L32 Ribosomal Protein; Belongs to the bacterial ribosomal protein bL32 family. (59 aa)
rl35L35 Ribosomal Protein; Belongs to the bacterial ribosomal protein bL35 family. (64 aa)
rl20L20 Ribosomal Protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity). (123 aa)
rs15S15 Ribosomal Protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (89 aa)
Your Current Organism:
Chlamydia trachomatis
NCBI taxonomy Id: 272561
Other names: C. trachomatis D/UW-3/CX, Chlamydia trachomatis D/UW-3/CX, Chlamydia trachomatis str. D/UW-3/CX, Chlamydia trachomatis strain D/UW-3/CX
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.