STRINGSTRING
CA_C0613 CA_C0613 CA_C0614 CA_C0614 CA_C1335 CA_C1335 tlp tlp CA_C1522 CA_C1522 CA_C2808 CA_C2808
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CA_C0613Spore coat protein F. (98 aa)
CA_C0614Spore coat protein F. (76 aa)
CA_C1335Spore coat protein F (COTF) related protein. (189 aa)
tlpUncharacterized protein, similar to TlpA of B.subtilis; Belongs to the Tlp family. (75 aa)
CA_C1522Small acid-soluble spore protein. (66 aa)
CA_C2808Beta-lactamase class C domain (PBPX family) containing protein. (739 aa)
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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