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CA_C0117 CA_C0117 cheA cheA cheW cheW CA_C0120 CA_C0120 cheR cheR cheY cheY CA_C0250 CA_C0250 motA motA motB motB CA_C0381 CA_C0381 CA_C0432 CA_C0432 CA_C0433 CA_C0433 CA_C0542 CA_C0542 CA_C0543 CA_C0543 CA_C0805 CA_C0805 CA_C0815 CA_C0815 CA_C0909 CA_C0909 chev chev CA_C1387 CA_C1387 CA_C1555 CA_C1555 CA_C1600 CA_C1600 CA_C1601 CA_C1601 CA_C1634 CA_C1634 motB-2 motB-2 motA-2 motA-2 flgG flgG flgG-2 flgG-2 CA_C2142 CA_C2142 sigD sigD CA_C2144 CA_C2144 CA_C2145 CA_C2145 flhF flhF flhA flhA fliR/flhB fliR/flhB fliQ fliQ fliP fliP fliZ fliZ fliL fliL flbD flbD flgE flgE flgD flgD fliK fliK fliJ fliJ fliI fliI fliH fliH fliG fliG fliF fliF fliE fliE flgC flgC flgB flgB CA_C2167 CA_C2167 hag hag fliD fliD fliS fliS CA_C2208 CA_C2208 csrA csrA fliW fliW flgL flgL FlgK FlgK flgm flgm fliY fliY FliM FliM cheW-2 cheW-2 cheY-2 cheY-2 cheC cheC cheA-2 cheA-2 cheR-2 cheR-2 cheB cheB cheD cheD cheW-3 cheW-3 CA_C2547 CA_C2547 CA_C2617 CA_C2617 CA_C2745 CA_C2745 CA_C2746 CA_C2746 CA_C2763 CA_C2763 CA_C2774 CA_C2774 CA_C2821 CA_C2821 CA_C3352 CA_C3352 CA_C3388 CA_C3388 CA_C3397 CA_C3397 CA_C3476 CA_C3476 CA_C3511 CA_C3511 CA_C3688 CA_C3688
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CA_C0117Protein cheY homolog. (121 aa)
cheAChemotaxis protein cheA. (649 aa)
cheWChemotaxis protein cheW. (168 aa)
CA_C0120Membrane-associated methyl-accepting chemotaxis protein with HAMP domain. (555 aa)
cheRChemotaxis protein methyltransferase (cheR). (270 aa)
cheYChemotaxis respons regulator (cheY). (126 aa)
CA_C0250Methyl-accepting chemotaxis protein. (688 aa)
motAChemotaxis motility protein A, gene motA. (262 aa)
motBChemotaxis motility protein B, gene motB. (256 aa)
CA_C0381Methyl-accepting chemotaxis protein. (282 aa)
CA_C0432Methyl-accepting chemotaxis protein. (337 aa)
CA_C0433Methyl-accepting chemotaxis protein. (441 aa)
CA_C0542Methyl-accepting chemotaxis protein. (575 aa)
CA_C0543Methyl-accepting chemotaxis protein. (579 aa)
CA_C0805Methyl-accepting chemotaxis protein. (668 aa)
CA_C0815Methyl-accepting chemotaxis protein. (499 aa)
CA_C0909Methyl-accepting chemotaxis protein, contain HAMP domain. (667 aa)
chevChemotaxis protein CheV ortholog (CheW-like adaptor domain and CheY-like reciever domain). (300 aa)
CA_C1387Membrane associated chemotaxis sensory transducer protein (MSP domain and HAMP domain). (571 aa)
CA_C1555Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (278 aa)
CA_C1600Methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer). (673 aa)
CA_C1601Methyl-accepting chemotaxis-like protein (chemotaxis sensory transducer). (279 aa)
CA_C1634Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (269 aa)
motB-2Flagellar motor protein MotB. (254 aa)
motA-2Flagellar motor component MotA. (259 aa)
flgGFlagellar basal body rod protein. (256 aa)
flgG-2Flagellar basal body rod protein. (258 aa)
CA_C2142Hypothetical protein. (148 aa)
sigDSigma factor of SigD/WhiG family; Belongs to the sigma-70 factor family. (241 aa)
CA_C2144Uncharacterized protein, YPFA B.subtilis ortholog. (222 aa)
CA_C2145ATPases involved in chromosome partitioning, MinD family, YLXH B.subtilis ortholog. (287 aa)
flhFFlagellar GTP-binding protein, FlhF. (389 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (690 aa)
fliR/flhBFliR/FlhB fusion protein; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (610 aa)
fliQFlagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliPFlagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (261 aa)
fliZFlagellar biosynthesis protein FliZ. (117 aa)
fliLFlagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (171 aa)
flbDFlagellar protein flbD. (64 aa)
flgEFlagellar hook protein FlgE. (423 aa)
flgDFlagellar hook assembly protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. (239 aa)
fliKFlagellar hook-length control protein fliK. (465 aa)
fliJFlagellar protein FliJ. (145 aa)
fliIFlagellar-Type ATPase. (438 aa)
fliHFlagellar assembly protein FliH. (246 aa)
fliGFlagellar motor switch protein FliG. (338 aa)
fliFFlagellar basal body M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (544 aa)
fliEFlagellar hook-basal body protein FliE. (111 aa)
flgCFlagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (143 aa)
flgBFlagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. (134 aa)
CA_C2167Flagellin family protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (283 aa)
hagPossible hook-associated protein, flagellin family; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (275 aa)
fliDFlagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (638 aa)
fliSFlagellar protein FliS. (126 aa)
CA_C2208Flagellin family protein, YVYC B.subtilis ortholog. (116 aa)
csrACarbon storage regulator, csrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (73 aa)
fliWUncharacterized protein, YVIF B.subtilis homolog; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (141 aa)
flgLFlagellin. (425 aa)
FlgKFlagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. (634 aa)
flgmRegulator of flagellin synthesis, FLGM. (93 aa)
fliYFlagellar switch protein FliY, contains CheC-like domain. (413 aa)
FliMFlagellar switch protein FliM. (331 aa)
cheW-2Chemotaxis signal transduction protein CheW. (132 aa)
cheY-2Chemotaxis signal receiving protein CheY. (119 aa)
cheCChemotaxis protein CheC. (200 aa)
cheA-2Chemotaxis histidine kinase, CheA (contains CheW-like adaptor domain). (693 aa)
cheR-2Chemotaxis protein methyltransferase, cheR. (255 aa)
cheBChemotaxis protein CheB, (CheY-like receiver domain and methylesterase domain); Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (345 aa)
cheDChemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (166 aa)
cheW-3Chemotaxis protein CheW. (147 aa)
CA_C2547Possible membrane-associated methyl-accepting chemotaxis protein fused to HAMP domain. (665 aa)
CA_C2617Membrane associated methyl-chemotaxis protein, HAMP domain containing. (664 aa)
CA_C2745Membrane associated methyl-accepting chemotaxis protein. (455 aa)
CA_C2746Membrane associated methyl-accepting chemotaxis protein (with HAMP domain). (570 aa)
CA_C2763Membrane assosiated methyl-accepting chemotaxis protein with HAMP domain. (571 aa)
CA_C2774Methyl-accepting chemotaxis protein with HAMP domain. (589 aa)
CA_C2821Methyl-accepting chemotaxis protein. (678 aa)
CA_C3352Membrane associated methyl-accepting chemotaxis protein with HAMP domain. (703 aa)
CA_C3388Methyl-accepting chemotaxis protein. (382 aa)
CA_C3397Membrane associated methyl-accepting chemotaxis protein (with HAMP domain). (570 aa)
CA_C3476Methyl-accepting chemotaxis protein. (582 aa)
CA_C3511Membrane associated methyl-accepting chemotaxis protein with HAMP domain. (573 aa)
CA_C3688Membrane-associated methyl-accepting chemotaxis protein with HAMP domain. (702 aa)
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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