STRINGSTRING
CA_C2178 CA_C2178 fcl fcl gmd gmd CA_C2311 CA_C2311 CA_C2312 CA_C2312 CA_C2313 CA_C2313 CA_C2314 CA_C2314 CA_C2315 CA_C2315 CA_C2316 CA_C2316 tagA tagA CA_C2318 CA_C2318 CA_C2319 CA_C2319 CA_C2320 CA_C2320 CA_C2321 CA_C2321 CA_C2326 CA_C2326 CA_C2327 CA_C2327 CA_C2328 CA_C2328 CA_C2329 CA_C2329 CA_C2330 CA_C2330 CA_C2331 CA_C2331 spsJ spsJ spsI spsI CA_C2874 CA_C2874 tagO tagO CA_C2968 CA_C2968 CA_C2981 CA_C2981
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CA_C2178Predicted CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; Belongs to the DegT/DnrJ/EryC1 family. (384 aa)
fclNucleoside-diphosphate-sugar epimerase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (309 aa)
gmdGDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (355 aa)
CA_C2311Nitroreductase family protein. (187 aa)
CA_C2312Rhamnosyl transferase, rfbQ. (303 aa)
CA_C2313Glycosyltransferase. (377 aa)
CA_C2314Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family. (472 aa)
CA_C2315DTDP-4-dehydrorhamnose reductase, rfbD ortholog; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (280 aa)
CA_C2316Polysaccharide deacetylase-like protein; Xylanase/chitin deacetylase family enzyme. (289 aa)
tagATeichoic acid biosynthesis protein, tagA; Belongs to the glycosyltransferase 26 family. (250 aa)
CA_C2318Membrane protein of EXOQ family, involved in exopolysaccharide production. (406 aa)
CA_C2319Hypothetical protein. (70 aa)
CA_C2320Predicted glycosyltransferase. (254 aa)
CA_C2321Predicted glycosyltransferase. (298 aa)
CA_C2326Diverged glycosyltransferase domain containing protein. (436 aa)
CA_C2327Glycosyltransferase domain containing protein. (1044 aa)
CA_C2328Polysaccharide ABC transporter, ATPase component. (419 aa)
CA_C2329Polysaccharide ABC transporter, permease component. (258 aa)
CA_C2330Sugar transferase involved in lipopolysaccharide synthesis. (461 aa)
CA_C2331DTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (185 aa)
spsJDTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (351 aa)
spsIDTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (288 aa)
CA_C2874UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (385 aa)
tagOUndecaprenyl-phosphate. (344 aa)
CA_C2968Mannose-1-phosphate guanylyltransferase. (356 aa)
CA_C2981Mannose-1-phosphate guanyltransferase (pyrophosphorylase domain and phosphomannomutase domain). (815 aa)
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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