STRINGSTRING
CA_C1522 CA_C1522 CA_C1620 CA_C1620 CA_C1663 CA_C1663 sspA sspA sspA-2 sspA-2 CA_C2857 CA_C2857 spo0A spo0A gpr gpr tlp tlp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CA_C1522Small acid-soluble spore protein. (66 aa)
CA_C1620Small acid-soluble spore protein. (64 aa)
CA_C1663Hypothetical protein. (58 aa)
sspASmall acid-soluble spore protein. (65 aa)
sspA-2Small acid-soluble spore protein. (87 aa)
CA_C2857Spore protease GPR related protein, YYAC B.subtilis ortholog. (188 aa)
spo0ASpo0A protein, (CheY-like receiver domain and HTH-type DNA binding domain); May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process (By similarity). (281 aa)
gprSpore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. (327 aa)
tlpUncharacterized protein, similar to TlpA of B.subtilis; Belongs to the Tlp family. (75 aa)
Your Current Organism:
Clostridium acetobutylicum
NCBI taxonomy Id: 272562
Other names: C. acetobutylicum ATCC 824, Clostridium acetobutylicum ATCC 824, Clostridium acetobutylicum DSM 792, Clostridium acetobutylicum str. ATCC 824, Clostridium acetobutylicum strain ATCC 824
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