STRINGSTRING
CAJ66954.1 CAJ66954.1 CAJ67026.1 CAJ67026.1 CAJ67027.1 CAJ67027.1 CAJ67028.1 CAJ67028.1 CAJ67029.1 CAJ67029.1 CAJ67030.1 CAJ67030.1 CAJ67031.1 CAJ67031.1 CAJ67577.1 CAJ67577.1 fruABC fruABC fruK fruK CAJ69155.1 CAJ69155.1 mtlD mtlD mtlF mtlF mtlR mtlR mtlA mtlA CAJ69454.1 CAJ69454.1 CAJ69738.1 CAJ69738.1 CAJ69906.1 CAJ69906.1 CAJ69907.1 CAJ69907.1 CAJ69908.1 CAJ69908.1 CAJ69909.1 CAJ69909.1 CAJ69910.1 CAJ69910.1 tagABC tagABC tagK tagK CAJ69975.1 CAJ69975.1 mngA mngA CAJ70025.1 CAJ70025.1 CAJ70026.1 CAJ70026.1 CAJ70027.1 CAJ70027.1 LacC LacC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAJ66954.1Transcription antiterminator, PTS operon regulator. (637 aa)
CAJ67026.1Transcription antiterminator, PTS operon regulator; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (676 aa)
CAJ67027.1PTS system, fructose-like IIA component; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (150 aa)
CAJ67028.1PTS system, fructose-like IIC component; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (351 aa)
CAJ67029.1PTS system, fructose-like IIB component; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (102 aa)
CAJ67030.1Putative tagatose 6-phosphate kinase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: up-regulated in Spo0A mutant PMID:24568651. (421 aa)
CAJ67031.1Putative hydrolase, HAD superfamily, subfamily IA; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (237 aa)
CAJ67577.1Transcriptional regulator, DeoR family. (254 aa)
fruABCFragment of membrane protein, abortive infection-type protein. (639 aa)
fruKFructose 1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (305 aa)
CAJ69155.1Transcription antiterminator, PTS operon regulator. (592 aa)
mtlDMannitol-1-phosphate 5-dehydrogenase. (383 aa)
mtlFPTS system, mannitol-specific, EIIA component; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: up-regulated in Spo0A mutant PMID:24568651. (140 aa)
mtlRTranscription antiterminator, PTS operon regulator. (709 aa)
mtlAPTS system, mannitol-specific, IICB component. (474 aa)
CAJ69454.1Transcription antiterminator. (642 aa)
CAJ69738.1Transcriptional regulator, DeoR family. (261 aa)
CAJ69906.1Putative alpha-mannosidase. (866 aa)
CAJ69907.1PTS system, mannose-specfic IIC component. (371 aa)
CAJ69908.1PTS system, mannose-specfic IIB component. (106 aa)
CAJ69909.1PTS system, mannose-specfic IIA component. (153 aa)
CAJ69910.1Transcription antiterminator, PTS operon regulator. (656 aa)
tagABCPTS system, tagatose-specific IIABC component. (638 aa)
tagKTagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (306 aa)
CAJ69975.1Transcription antiterminator, PTS operon regulator. (637 aa)
mngAPTS system, 2-O-a-mannosyl-D-glycerate-specific IIABC component. (641 aa)
CAJ70025.1PTS system, fructose-like IIA component. (149 aa)
CAJ70026.1Transcription antiterminator, PTS operon regulator; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (635 aa)
CAJ70027.1PTS system, fructose-like IIABC component. (631 aa)
LacCPutative carbohydrate/purine kinase; putative tagatose-6-phosphate kinase LacC; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (309 aa)
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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