STRINGSTRING
fliN fliN flgB flgB flgC flgC fliE fliE fliF fliF fliG fliG fliH fliH fliI fliI fliJ fliJ fliK fliK flgD flgD flgE flgE fliL fliL fliZ fliZ fliP fliP fliQ fliQ flhB flhB flhA flhA flgG1 flgG1 flgG flgG fliM fliM fliN1 fliN1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fliNFlagellar motor switch protein FliN. (104 aa)
flgBFlagellar basal-body rod protein FlgB; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (105 aa)
flgCFlagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. (134 aa)
fliEFlagellar hook-basal body complex protein FliE; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (105 aa)
fliFFlagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. (516 aa)
fliGFlagellar motor switch protein FliG; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (356 aa)
fliHFlagellar assembly protein FliH; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: down-regulated in Spo0A mutant PMID:24568651. (243 aa)
fliIATP synthase subunit beta FliI; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (439 aa)
fliJFlagellar protein FliJ; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (146 aa)
fliKFlagellar hook-length control protein FliK; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (401 aa)
flgDBasal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. (202 aa)
flgEFlagellar hook protein FlgE (Distal rod protein). (327 aa)
fliLFlagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (147 aa)
fliZFlagellar protein FliZ; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (124 aa)
fliPFlagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (221 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
flhBBifunctional flagellar biosynthesis protein FliR/FlhB; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (604 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (691 aa)
flgG1Flagellar hook-basal body complex protein FlgG1; Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: up-regulated in Spo0A mutant PMID:24568651. (257 aa)
flgGFlagellar basal body rod protein FlgG. (253 aa)
fliMFlagellar motor switch protein FliM. (293 aa)
fliN1Flagellar motor switch phosphatase FliN1. (124 aa)
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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