STRINGSTRING
CAJ69267.1 CAJ69267.1 CAJ69309.1 CAJ69309.1 PatB1 PatB1 CAJ69388.1 CAJ69388.1 AspD AspD CobD1 CobD1 cobD cobD CAJ70252.1 CAJ70252.1 malY malY CAJ67914.1 CAJ67914.1 aspC aspC PatA PatA aspB aspB CAJ69620.1 CAJ69620.1 PatB2 PatB2 CAJ70573.1 CAJ70573.1 PatB3 PatB3 CAJ68270.1 CAJ68270.1 hisC hisC hisC-2 hisC-2 CAJ69139.1 CAJ69139.1 CD630_22850 CD630_22850
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CAJ69267.1Putative pyridoxal phosphate-dependent transferase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (419 aa)
CAJ69309.1Putative pyridoxal phosphate-dependent transferase. (402 aa)
PatB1Putative aminotransferase. (392 aa)
CAJ69388.1Putative pyridoxal phosphate-dependent transferase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant. Experimentally verified through Mass Spectrometry as part of Spo0A regulated proteome: up-regulated in Spo0A mutant PMID:24568651. (367 aa)
AspDPutative L-aspartate-beta-decarboxylase; Experimentally verified as part of mature spore proteome PMID:19542279. (542 aa)
CobD1Putative threonine-phosphate decarboxylase. (358 aa)
cobDThreonine-phosphate decarboxylase (L-threonine-O-3-phosphate decarboxylase), CobD/CbiB family. (356 aa)
CAJ70252.1Transcriptional regulator, GntR family. (471 aa)
malYBifunctional protein: cystathionine beta-lyase / repressor. (394 aa)
CAJ67914.1Putative aminotransferase. (484 aa)
aspCAspartate aminotransferase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. (394 aa)
PatAPutative pyridoxal phosphate-dependent transferase. (399 aa)
aspBAspartate aminotransferase (AspAT) (Transaminase A); Experimentally verified as part of mature spore proteome PMID:19542279. (398 aa)
CAJ69620.1Putative pyridoxal phosphate-dependent transferase. (388 aa)
PatB2Putative pyridoxal phosphate-dependent transferase. (396 aa)
CAJ70573.1Putative aminotransferase; Experimentally verified through RNA-seq as part of Spo0A regulated transcriptome: up-regulated in Spo0A mutant PMID:24568651. Experimentally verified as part of mature spore proteome PMID:19542279. (398 aa)
PatB3Putative pyridoxal phosphate-dependent transferase (PLP-dependent transferase). (395 aa)
CAJ68270.1Transcriptional regulator, GntR family. (482 aa)
hisCHistidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase); Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (349 aa)
hisC-2Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (367 aa)
CAJ69139.1Transcriptional regulator, GntR family. (460 aa)
CD630_22850Fragment of putative beta-lactamase inducer (C-terminal region). (461 aa)
Your Current Organism:
Clostridioides difficile
NCBI taxonomy Id: 272563
Other names: C. difficile 630, Clostridioides difficile 630, Clostridium difficile 630, Clostridium difficile 630 (epidemic type X), Clostridium difficile str. 630, Clostridium difficile strain 630, Peptoclostridium difficile 630
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